ROUGE |
Gene/Protein Characteristic Table for mKIAA0762 |
Link to : HUGE | SWISS-PROT/TrEMBL | |
Features : DNA sequence | Protein sequence | |
Accession No. : | AK173021 |
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spondin 1, (f-spondin) extracellular matrix protein. | |
mbg11441 [Vector Info] | |
Source : | Mouse brain |
Features of the cloned DNA sequence |
Description | |
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Length: 5573 bp
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cloned DNA seq. | |
Warning for N-terminal truncation: | YES |
Warning for coding interruption: | YES |
Length of 3'UTR 3973 bp Genome contig ID gi65511124f_107518917 PolyA signal sequence
(None) +----*----+----*----+----*----+----
TGTATTTTCCTTAACACACGAGAGCCTGTTCAATTFlanking genome sequence
(375280 - 375329) ----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAATCTCGCTGGGTCTGTCTTT
KIAA Alignment based on: KIAA0762 DNA sequence, AA sequence, Physical map
Features of the protein sequence |
Description | |
Coding region: 2..1534, 3634..4290
Length: 729 aa
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
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HMMPfam | IPR002861 | 42 | 172 | PF02014 | Reeler region |
IPR009465 | 173 | 414 | PF06468 | Spondin | |
IPR000884 | 445 | 493 | PF00090 | Thrombospondin | |
IPR000884 | 540 | 587 | PF00090 | Thrombospondin | |
IPR000884 | 594 | 642 | PF00090 | Thrombospondin | |
IPR000884 | 680 | 729 | PF00090 | Thrombospondin | |
HMMSmart | IPR000884 | 444 | 494 | SM00209 | Thrombospondin |
IPR000884 | 539 | 588 | SM00209 | Thrombospondin | |
IPR000884 | 593 | 643 | SM00209 | Thrombospondin | |
IPR000884 | 679 | 728 | SM00209 | Thrombospondin | |
ProfileScan | IPR000884 | 441 | 495 | PS50092 | Thrombospondin |
IPR000884 | 536 | 589 | PS50092 | Thrombospondin | |
IPR000884 | 590 | 644 | PS50092 | Thrombospondin | |
IPR000884 | 676 | 729 | PS50092 | Thrombospondin |
Method | From | To | amino acid sequence |
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- | - | - | - |
How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage ![]() | |