Miyakogusa Predicted Gene

Lj6g3v2193420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M1V8_SOYBN 726 63.7 73.6 (tr|K7M1V8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G51580.1 228 34.9 52.5 | Symbols: | RNA-binding KH domain-containing protein | chr1:19125612-19128102 FORWARD LENGTH=621
Medicago Medtr2g009650.1 699 60.9 68.3 | RNA-binding KH domain protein | HC | chr2:2001720-2009761 | 20130731
Soybean Glyma13g32960.1 709 63.7 73.8  
LJGI gnl|LJGI|TC74444 680 100.0 100.0 similar to UniRef100_A7QM31 Cluster: Chromosome undetermined scaffold_123, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_123, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2193420.1 length: 699 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 1.5e-11 46-135
145-219
297-373
389-464
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 7.6e-13 50-100
149-211
301-351
392-456
ProfileScan PS50084 KH_TYPE_1 16.059 47-123
146-214
298-365
390-463
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 2.5e-15 43-100
146-220
296-352
388-463
HMMPanther PTHR10288 KH 6.4e-98 24-489
HMMPanther PTHR10288:SF53 KH 6.4e-98 24-489
Seg seg seg NA 263-275
310-321
496-507
superfamily SSF54791 Eukaryotic 2.3e-12 377-465
133-220
34-102
286-377
Wolf-PSORT
Lj6g3v2193420.1	nucl 4.5, cyto_nucl 4, chlo 3, cyto 2.5, golg 2, plas 1, E.R. 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2193420.1