Miyakogusa Predicted Gene
- Lj4g3v0818950.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K1J8_SOYBN |
159 |
81.2 |
86.5 |
(tr|I1K1J8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G11010.3 |
105 |
68.4 |
78.9 |
| Symbols: | Pre-mRNA cleavage complex II protein family | chr5:3484176-3486067 FORWARD LENGTH=368 |
| Medicago |
Medtr8g080150.1 |
129 |
66.3 |
79.6 |
| polynucleotide 5-hydroxyl-kinase NOL9-like protein | HC | chr8:34427716-34424835 | 20130731 |
| Soybean |
Glyma05g08830.2 |
159 |
81.2 |
86.5 |
|
| LJGI |
gnl|LJGI|TC68680 |
509 |
99.2 |
99.2 |
similar to UniRef100_A7QI09 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0818950.1 |
length: 106 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
1.4e-06 |
30-76 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
0.0003 |
29-76 |
| HMMPanther |
PTHR12755 |
CLEAVAGE/POLYADENYLATION |
1.3e-17 |
23-84 |
| HMMPfam |
PF03205 |
MobB |
1.1e-08 |
31-76 |
- Wolf-PSORT
Lj4g3v0818950.1 chlo 5, cyto 4, nucl 3, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0818950.1 |
|