Miyakogusa Predicted Gene

Lj4g3v0818950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0818950.1 tr|A9TMQ8|A9TMQ8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_147793,54.65,7e-18,P-loop containing nucleoside
triphosphate hydrolases,NULL; no description,NULL;
CLEAVAGE/POLYADENYLA,CUFF.48083.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08830.2                                                       159   6e-40
Glyma05g08830.1                                                       159   6e-40
Glyma06g19970.1                                                       132   7e-32
Glyma04g34690.1                                                       130   3e-31

>Glyma05g08830.2 
          Length = 372

 Score =  159 bits (402), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 83/96 (86%), Gaps = 1/96 (1%)

Query: 3  MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLLHRYSRVA 62
          M SSPSPDIYIPEQWSEAA SIA SS PPI LICGAKNCGKT FSRYLLNVLLH+Y++VA
Sbjct: 1  MDSSPSPDIYIPEQWSEAAESIAHSSMPPIALICGAKNCGKTTFSRYLLNVLLHKYTKVA 60

Query: 63 YLDTDVGQPEFTAPAFLSLTIVHQETPGRLKNPCVN 98
          YLDTDVGQPEFT PAFLSLTIVH+ TP  L  PC+ 
Sbjct: 61 YLDTDVGQPEFTPPAFLSLTIVHKVTPD-LTVPCLK 95


>Glyma05g08830.1 
          Length = 372

 Score =  159 bits (402), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 83/96 (86%), Gaps = 1/96 (1%)

Query: 3  MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLLHRYSRVA 62
          M SSPSPDIYIPEQWSEAA SIA SS PPI LICGAKNCGKT FSRYLLNVLLH+Y++VA
Sbjct: 1  MDSSPSPDIYIPEQWSEAAESIAHSSMPPIALICGAKNCGKTTFSRYLLNVLLHKYTKVA 60

Query: 63 YLDTDVGQPEFTAPAFLSLTIVHQETPGRLKNPCVN 98
          YLDTDVGQPEFT PAFLSLTIVH+ TP  L  PC+ 
Sbjct: 61 YLDTDVGQPEFTPPAFLSLTIVHKVTPD-LTVPCLK 95


>Glyma06g19970.1 
          Length = 340

 Score =  132 bits (332), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 72/86 (83%), Gaps = 1/86 (1%)

Query: 13 IPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPE 72
          IPEQW EA  SIA+SS PPITLICGAKNC KT FSRYLLNVLL++Y++VAYLDTDVGQPE
Sbjct: 1  IPEQWLEATESIANSSMPPITLICGAKNCAKTTFSRYLLNVLLNKYTKVAYLDTDVGQPE 60

Query: 73 FTAPAFLSLTIVHQETPGRLKNPCVN 98
          FT PAFLSLTIVH+ T   L  PC+ 
Sbjct: 61 FTPPAFLSLTIVHKVT-SDLTVPCLK 85


>Glyma04g34690.1 
          Length = 347

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/86 (74%), Positives = 71/86 (82%), Gaps = 1/86 (1%)

Query: 13 IPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPE 72
          IPEQW EA  SIA SS  PI LICGAKNCGKT FSRYLLN+LL++Y++VAYLDTDVGQPE
Sbjct: 1  IPEQWLEATESIAHSSMLPIALICGAKNCGKTTFSRYLLNILLNKYTKVAYLDTDVGQPE 60

Query: 73 FTAPAFLSLTIVHQETPGRLKNPCVN 98
          FT PAFLSLTIVH+ TP  L  PC+ 
Sbjct: 61 FTPPAFLSLTIVHKVTPD-LTVPCLK 85