Miyakogusa Predicted Gene

Lj4g3v0818950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0818950.1 tr|A9TMQ8|A9TMQ8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_147793,54.65,7e-18,P-loop containing nucleoside
triphosphate hydrolases,NULL; no description,NULL;
CLEAVAGE/POLYADENYLA,CUFF.48083.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080150.1 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   129   4e-31
Medtr8g080140.1 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   112   1e-25
Medtr8g080140.2 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   112   1e-25

>Medtr8g080150.1 | polynucleotide 5-hydroxyl-kinase NOL9-like
          protein | HC | chr8:34427716-34424835 | 20130731
          Length = 380

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 4/98 (4%)

Query: 3  MGSSPS---PDIYIPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLLHRYS 59
          MGSS +   PDIYIP++WS+AA SI  S TPPITL+CGA NCGK+ FSR LLNVLL R +
Sbjct: 1  MGSSSAFVLPDIYIPQKWSQAANSITSSPTPPITLVCGASNCGKSTFSRNLLNVLLTRCN 60

Query: 60 RVAYLDTDVGQPEFTAPAFLSLTIVHQETPGRLKNPCV 97
          +VAYL+TDVGQPEFT P F+SLTIV++ TP  L  PC+
Sbjct: 61 KVAYLETDVGQPEFTPPGFVSLTIVNKVTPD-LTIPCL 97


>Medtr8g080140.1 | polynucleotide 5-hydroxyl-kinase NOL9-like
          protein | HC | chr8:34420627-34415871 | 20130731
          Length = 370

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%)

Query: 3  MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLL-HRYSRV 61
          MGS P PDI+IPE+WS+AA SI  SSTPP+ L+CG  + GK+ F+RYLLN+LL  R  +V
Sbjct: 1  MGSYPPPDIFIPEEWSQAANSIVSSSTPPVVLVCGPGSVGKSTFARYLLNLLLTTRCKKV 60

Query: 62 AYLDTDVGQPEFTAPAFLSLTIVHQETP 89
          AYLDTDVGQ EFT    +SLT+V+  TP
Sbjct: 61 AYLDTDVGQTEFTPLGLISLTVVYDITP 88


>Medtr8g080140.2 | polynucleotide 5-hydroxyl-kinase NOL9-like
          protein | HC | chr8:34420627-34415871 | 20130731
          Length = 370

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%)

Query: 3  MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNCGKTIFSRYLLNVLL-HRYSRV 61
          MGS P PDI+IPE+WS+AA SI  SSTPP+ L+CG  + GK+ F+RYLLN+LL  R  +V
Sbjct: 1  MGSYPPPDIFIPEEWSQAANSIVSSSTPPVVLVCGPGSVGKSTFARYLLNLLLTTRCKKV 60

Query: 62 AYLDTDVGQPEFTAPAFLSLTIVHQETP 89
          AYLDTDVGQ EFT    +SLT+V+  TP
Sbjct: 61 AYLDTDVGQTEFTPLGLISLTVVYDITP 88