| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LPF1_SOYBN | 1543 | 78.2 | 86.2 | (tr|K7LPF1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT2G43410.4 | 631 | 41.8 | 55.5 | | Symbols: FPA | RNA binding | chr2:18026397-18030989 REVERSE LENGTH=901 |
| Medicago | Medtr4g068120.2 | 1335 | 70.3 | 78.0 | | flowering time control FPA-like protein | HC | chr4:25458538-25448035 | 20130731 |
| Soybean | Glyma11g13490.1 | 1361 | 70.6 | 78.0 | |
| LJGI | gnl|LJGI|TC78217 | 1098 | 99.8 | 99.8 | similar to UniRef100_Q52ZH7 Cluster: FPA; n=2; Pisum sativum|Rep: FPA - Pisum sativum (Garden pea), partial (19%) |
| Lj3g3v3315960.1 | length: 992 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 5.5e-13 | 25-85 102-166 |
| HMMSmart | SM00360 | RNA | 2.8e-06 | 24-91 101-168 221-289 |
| ProfileScan | PS50102 | RRM | 10.684 | 23-95 100-172 220-293 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 8.4e-13 | 11-93 96-177 214-296 |
| IPR012921 | Spen paralogue and orthologue SPOC, C-terminal | |||
| HMMPfam | PF07744 | SPOC | 3.3e-07 | 508-604 |
| no_ID | ||||
| HMMPanther | PTHR23189 | RNA | 2.7e-170 | 22-750 |
| HMMPanther | PTHR23189:SF31 | FPA | 2.7e-170 | 22-750 |
| HMMPfam | PF13893 | RRM_5 | 1.3e-11 | 237-291 |
| Seg | seg | seg | NA | 2-22 975-992 |
| superfamily | SSF54928 | RNA-binding | 1.5e-22 | 98-300 2-97 |
Lj3g3v3315960.1 nucl 8, chlo 3, cyto 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v3315960.1 |