Miyakogusa Predicted Gene

Lj3g3v2809850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LW36_SOYBN 540 72.3 79.2 (tr|K7LW36) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G44280.1 300 46.3 58.6 | Symbols: ATRING1A, RING1A | RING 1A | chr5:17836115-17839114 REVERSE LENGTH=522
Medicago Medtr2g090595.1 501 65.7 76.1 | RING zinc finger protein | HC | chr2:38732918-38738851 | 20130731
Soybean Glyma12g13270.1 510 69.5 77.9  
LJGI gnl|LJGI|TC68044 1074 100.0 100.0 similar to UniRef100_UPI0001505860 Cluster: protein binding / zinc ion binding; n=1; Arabidopsis thaliana|Rep: protein binding / zinc ion binding - Arabidopsis thaliana, partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2809850.1 length: 511 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 9.6e-07 132-171
ProfileScan PS50089 ZF_RING_2 12.120 132-172
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1e-15 114-191
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 148-157
no_ID  
Coil coil coiled-coil NA 57-94
198-230
HMMPanther PTHR10825 RING 4.3e-111 28-509
HMMPanther PTHR10825:SF4 RING 4.3e-111 28-509
HMMPfam PF13923 zf-C3HC4_2 1.2e-08 129-173
Seg seg seg NA 7-21
44-92
97-117
199-212
270-289
359-372
superfamily SSF57850 RING/U-box 1.2e-14 125-197
Wolf-PSORT
Lj3g3v2809850.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2809850.1