Miyakogusa Predicted Gene
- Lj3g3v2809850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2809850.1 Non Chatacterized Hit- tr|I1M084|I1M084_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,34.51,0.000002,seg,NULL; Ring finger,Zinc finger, RING-type;
ZF_RING_1,Zinc finger, RING-type, conserved site; RING,CUFF.44718.1
(511 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g13270.1 510 e-144
Glyma12g33300.1 489 e-138
Glyma06g44470.1 479 e-135
Glyma13g37120.1 436 e-122
Glyma12g13270.2 340 2e-93
Glyma08g46510.1 124 3e-28
Glyma13g24570.1 114 2e-25
Glyma10g23070.1 112 1e-24
>Glyma12g13270.1
Length = 433
Score = 510 bits (1314), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/393 (69%), Positives = 306/393 (77%), Gaps = 7/393 (1%)
Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
+V+V + +IRK+VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 47 YVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 106
Query: 178 RRSLRDDPNYDALIASLYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
RRSLRDDPNYDALIA+LYP+I KNRNKQIQASIAK+ QRQSEALVKR
Sbjct: 107 RRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAKVAQRQSEALVKR 166
Query: 238 RRDTPGAFAPRSQRNQRNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQR 297
RRDTPG+F RSQRNQ+N+ SRRQNQVID QG RCTE QR
Sbjct: 167 RRDTPGSFVTRSQRNQQNVLSRRQNQVIDNQGSEDNEDENDNNEKDSSSTDERCTELRQR 226
Query: 298 RRKRWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTR 357
RRKR TR RPSQPSSS A PDGGC++SD+D+ R +SR VSKP+KLTWG GGFRS+TR
Sbjct: 227 RRKRQTRGRPSQPSSSTASPDGGCIESDMDI----RISSRPVSKPQKLTWGGGGFRSHTR 282
Query: 358 HXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEFDVHLLLVSLDK-STPSLEQPHLCCRP 416
H R+AKLV +LRSL+EN DE DVHL+L+SLDK STPSL+QPHLCCRP
Sbjct: 283 HGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDELDVHLILLSLDKQSTPSLQQPHLCCRP 342
Query: 417 TLTVKHLYEYVARQTPLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKD 476
TL+VKHL EYVA QTPLPVE VEI+AVKGCCST ++S D+ S+ DELTTL IDP KD
Sbjct: 343 TLSVKHLCEYVAHQTPLPVEEVEILAVKGCCSTVCDKSFDETSS--SDELTTLVIDPSKD 400
Query: 477 ELEILQEHESLAEIRSKCISKRDHLILAYRQKE 509
ELE LQ HESLA I+SKCISKR+HLILAYR+KE
Sbjct: 401 ELETLQGHESLAGIKSKCISKREHLILAYRRKE 433
>Glyma12g33300.1
Length = 365
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/366 (71%), Positives = 286/366 (78%), Gaps = 3/366 (0%)
Query: 146 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIASLYPDIXXXXXXX 205
MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIA+LYPDI
Sbjct: 1 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIEKYEQEE 60
Query: 206 XXXXXXXKNRNKQIQASIAKIVQRQSEALVKRRRDTPGAFAPRSQRNQRNIHSRRQNQVI 265
KNRNKQIQASIAK+VQRQSEALVKRR+DTPGAF R QRNQRNIHSRRQ Q
Sbjct: 61 LEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRPQRNQRNIHSRRQTQA- 119
Query: 266 DIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQRRRKRWTRVRPSQPSSSMAGPDGGCVDSD 325
I+G R TE QRRRKRW RVRPSQPSSSMA PDGGC DSD
Sbjct: 120 -IEGSEDNEEENDNNEKDSSSADERSTEHRQRRRKRWARVRPSQPSSSMASPDGGCNDSD 178
Query: 326 IDVSRENRGTSRQVSKPRKLTWGRGGFRSNTRHXXXXXXXXXXXXXXRLAKLVGHLRSLD 385
+D+S+ENRG SRQVSK KLTWGRGGFRSNTRH RL+K V HLR+LD
Sbjct: 179 MDISKENRGISRQVSKHGKLTWGRGGFRSNTRHGSGGGSNNKSSRSSRLSKFVDHLRNLD 238
Query: 386 ENIDEFDVHLLLVSLDK-STPSLEQPHLCCRPTLTVKHLYEYVARQTPLPVEAVEIMAVK 444
EN DEFDVHL+LVSLD+ STPSL+QP+LCCRPTL+VKHLYE+VARQTPLPVE +EI+AVK
Sbjct: 239 ENTDEFDVHLMLVSLDQLSTPSLQQPYLCCRPTLSVKHLYEHVARQTPLPVEGIEIVAVK 298
Query: 445 GCCSTNRNESADDASALVCDELTTLAIDPHKDELEILQEHESLAEIRSKCISKRDHLILA 504
GCCSTN ++SAD+ SAL DEL+ L IDPHKDELEILQ HE+LA +RSKCISK HLI+A
Sbjct: 299 GCCSTNCDKSADENSALAYDELSKLVIDPHKDELEILQGHETLAGLRSKCISKMGHLIIA 358
Query: 505 YRQKEA 510
Y+QKE
Sbjct: 359 YKQKEV 364
>Glyma06g44470.1
Length = 463
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/377 (69%), Positives = 288/377 (76%), Gaps = 7/377 (1%)
Query: 134 ICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAS 193
I GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIA+
Sbjct: 93 ILFGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA 152
Query: 194 LYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKRRRDTPGAFAPRSQRNQ 253
LYP+I KNRNKQIQASIAK+VQRQSEALVKRRRDTPG+F RSQRNQ
Sbjct: 153 LYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSEALVKRRRDTPGSFVTRSQRNQ 212
Query: 254 RNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQRRRKRWTRVRPSQPSSS 313
RN+ SRRQNQ +D QG RCTE QRRRKR TR RPSQPSSS
Sbjct: 213 RNVLSRRQNQGMDNQGSEDNEEENDNNEKDSSSTDERCTELRQRRRKRRTRGRPSQPSSS 272
Query: 314 MAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTRHXXXXXXXXXXXXXXR 373
A PDGGC++SD+D+ R +SR VSKP+KLTWGRGGFRS+TRH R
Sbjct: 273 TASPDGGCIESDMDI----RISSRLVSKPQKLTWGRGGFRSHTRHGSGNGSNSKSSRSSR 328
Query: 374 LAKLVGHLRSLDENIDEFDVHLLLVSLDKS-TPSLEQPHLCCRPTLTVKHLYEYVARQTP 432
LAKLV +L SL+EN DE DVHL+L+SLDK TPSL+QPHLCCRPTL+VKHL EYVA QTP
Sbjct: 329 LAKLVDYLHSLNENTDELDVHLILLSLDKQITPSLQQPHLCCRPTLSVKHLCEYVAHQTP 388
Query: 433 LPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKDELEILQEHESLAEIRS 492
L VE VEI+AVKGCCST ++S D+ S+ DELTTL IDP KDELE LQ HESLA I+S
Sbjct: 389 LLVEEVEILAVKGCCSTVCDKSFDETSS--SDELTTLVIDPSKDELETLQGHESLAGIKS 446
Query: 493 KCISKRDHLILAYRQKE 509
KCISKR+HLILAYR+KE
Sbjct: 447 KCISKREHLILAYRRKE 463
>Glyma13g37120.1
Length = 385
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/379 (67%), Positives = 285/379 (75%), Gaps = 7/379 (1%)
Query: 134 ICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAS 193
I IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI++
Sbjct: 11 IAYCIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISA 70
Query: 194 LYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKRRRDTPGAFAPRSQRNQ 253
LYPDI KNRNKQIQASIAK+VQRQSEALVKRR+DTPG F RSQRNQ
Sbjct: 71 LYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGTFVTRSQRNQ 130
Query: 254 RNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQRRRKRWTRVRPSQPSSS 313
RN + I+G R TE QRRRKRW RVR SQPSSS
Sbjct: 131 RNRRQTQA-----IEGSEDNEEENDNNEKNSSSDDERSTEHRQRRRKRWARVRSSQPSSS 185
Query: 314 MAGPDGGCVDSDIDVSRENRG-TSRQVSKPRKLTWGRGGFRSNTRHXXXXXXXXXXXXXX 372
M PDGGC DSD+D+SRENRG +SRQVSK KLTWGRGGFRSNTRH
Sbjct: 186 MTSPDGGCNDSDMDISRENRGISSRQVSKHGKLTWGRGGFRSNTRHGSGGSSNSKSSRSS 245
Query: 373 RLAKLVGHLRSLDENIDEFDVHLLLVSLD-KSTPSLEQPHLCCRPTLTVKHLYEYVARQT 431
RL+K V HLR+LDEN DEFDVHL+LVSLD +ST SL+QP+LCCRPTL+V+HLYE+VARQT
Sbjct: 246 RLSKFVDHLRNLDENTDEFDVHLMLVSLDQQSTSSLQQPYLCCRPTLSVRHLYEHVARQT 305
Query: 432 PLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKDELEILQEHESLAEIR 491
LPVE +EI+AVKGCCSTNR++S ++ S L DEL+TL IDPHKDELEILQ HE+L+ +R
Sbjct: 306 HLPVEGIEILAVKGCCSTNRDKSTNENSDLAYDELSTLVIDPHKDELEILQGHETLSGLR 365
Query: 492 SKCISKRDHLILAYRQKEA 510
SKCISK HLI+AY QKE
Sbjct: 366 SKCISKMGHLIIAYNQKEV 384
>Glyma12g13270.2
Length = 344
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/285 (64%), Positives = 207/285 (72%), Gaps = 4/285 (1%)
Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
+V+V + +IRK+VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 47 YVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 106
Query: 178 RRSLRDDPNYDALIASLYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
RRSLRDDPNYDALIA+LYP+I KNRNKQIQASIAK+ QRQSEALVKR
Sbjct: 107 RRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAKVAQRQSEALVKR 166
Query: 238 RRDTPGAFAPRSQRNQRNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQR 297
RRDTPG+F RSQRNQ+N+ SRRQNQVID QG RCTE QR
Sbjct: 167 RRDTPGSFVTRSQRNQQNVLSRRQNQVIDNQGSEDNEDENDNNEKDSSSTDERCTELRQR 226
Query: 298 RRKRWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTR 357
RRKR TR RPSQPSSS A PDGGC++SD+D+ R +SR VSKP+KLTWG GGFRS+TR
Sbjct: 227 RRKRQTRGRPSQPSSSTASPDGGCIESDMDI----RISSRPVSKPQKLTWGGGGFRSHTR 282
Query: 358 HXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEFDVHLLLVSLDK 402
H R+AKLV +LRSL+EN DE + + +K
Sbjct: 283 HGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDEMSISFFCLWTNK 327
>Glyma08g46510.1
Length = 360
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 71/101 (70%)
Query: 137 GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIASLYP 196
GII+ TR VMEC+HRFCR+CI+KS RLGNNECPACRTHC+SRRSLR+DPN+D LI LY
Sbjct: 16 GIIRNTRVVMECMHRFCRDCIEKSFRLGNNECPACRTHCSSRRSLREDPNFDNLIGLLYS 75
Query: 197 DIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
+I K +++Q + AK +RQS AL K+
Sbjct: 76 NIDKYEEEELNLSEDTKKSMQRMQKAYAKTYERQSIALGKK 116
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 332 NRGTSRQVSKPRKLTWGRGGFRSNTRHXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEF 391
N +S KL WG+ + + R+A+ + HL+ EN DE
Sbjct: 189 NEAVKDIISSADKLVWGKS---AQRSNNRSNSRNVAALRSNRIARFIDHLKVSQENDDEL 245
Query: 392 DVHLLLVSLD-KSTPSLEQPHLCCRPTLTVKHLYEYVARQTPLPVEAVEIMAVKGCCSTN 450
D+ + LVS + K P+L +P+L CRPTL++K L +YVA +T L E +E+ VK C
Sbjct: 246 DIFIKLVSFEEKRVPNLPRPYLSCRPTLSIKQLCQYVALETSLQTEEIELYLVKEC---- 301
Query: 451 RNESADDASALVCDELTTLAIDPHKDELEILQEHE-SLAEIRSKCISKRDHLILAYRQK 508
D S +D ++ E L E E ++A++++ +S HL++AY++K
Sbjct: 302 ---QPDIISG-------DGKLDEDNNKFEFLAEEEVTMAQLKTNNLS-FGHLVIAYKRK 349
>Glyma13g24570.1
Length = 226
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 58/69 (84%)
Query: 130 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDA 189
V IC GI++KT+ VMEC+HRFC +CI+KSMRL NNECP CR HC SRRSLRDDPN+D
Sbjct: 2 VDSAICEGILRKTKAVMECMHRFCGKCIEKSMRLSNNECPVCRVHCPSRRSLRDDPNFDN 61
Query: 190 LIASLYPDI 198
+IA++YPDI
Sbjct: 62 IIAAIYPDI 70
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 15/113 (13%)
Query: 391 FDVHLLLVSLD-KSTPSLEQPHLCCRPTLTVKHLYEYVARQTPLPVEAVEIMAVKGCCST 449
D+ L+LVSLD + P+L++P+L CRPT +VK L +YVA + L VE+ V+
Sbjct: 126 LDIPLVLVSLDEQKMPTLQEPYLHCRPTCSVKILCKYVALKVELLPNEVELSLVE----- 180
Query: 450 NRNESADDASALVCDELTTLAIDPHKDELEILQEHESLAEIRSKCISKRDHLI 502
+ + ++ DEL +DP+KD+L +L++ E+LA++ ++ HL+
Sbjct: 181 ------ESQTNVMRDELI---VDPNKDKLRVLRDEETLADLYKPNVTNCGHLV 224
>Glyma10g23070.1
Length = 67
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 134 ICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAS 193
+C GII+KTR VMEC+HRFC+ECI+KSMRLGNNECP CRTH ASRRSLR D N+D LI+
Sbjct: 1 LCAGIIRKTRAVMECMHRFCKECIEKSMRLGNNECPVCRTHVASRRSLRHDQNFDTLISL 60
Query: 194 LYPDI 198
LYPD+
Sbjct: 61 LYPDM 65