Miyakogusa Predicted Gene

Lj3g3v2809850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2809850.1 Non Characterized Hit- tr|I1M084|I1M084_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,34.51,0.000002,seg,NULL; Ring finger,Zinc finger, RING-type;
ZF_RING_1,Zinc finger, RING-type, conserved site; RING,CUFF.44718.1
         (511 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090595.1 | RING zinc finger protein | HC | chr2:38732918-...   501   e-142
Medtr2g090595.2 | RING zinc finger protein | HC | chr2:38732994-...   390   e-108
Medtr4g088520.1 | E3 ubiquitin-protein ligase RING1a-like protei...   271   9e-73
Medtr4g088520.2 | E3 ubiquitin-protein ligase RING1a-like protei...   227   2e-59
Medtr4g091110.1 | C3HC4-type RING zinc finger protein | LC | chr...   120   4e-27
Medtr6g080720.1 | C3HC4-type RING zinc finger protein | LC | chr...   115   1e-25
Medtr4g058600.1 | zinc finger, C3HC4 type (RING finger) protein ...    93   5e-19
Medtr7g056100.1 | hypothetical protein | LC | chr7:19495629-1950...    63   8e-10
Medtr2g018880.1 | breast cancer susceptibility-like protein, put...    50   5e-06

>Medtr2g090595.1 | RING zinc finger protein | HC |
           chr2:38732918-38738851 | 20130731
          Length = 504

 Score =  501 bits (1291), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/394 (65%), Positives = 300/394 (76%), Gaps = 4/394 (1%)

Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
           +VYV + DIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 111 YVYVELSDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 170

Query: 178 RRSLRDDPNYDALIASLYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
           RRSLRDDPNYDALIA+LYP+I              KNRNKQIQASIAK+ +RQSEAL K+
Sbjct: 171 RRSLRDDPNYDALIATLYPNIEKYEEEELEFREEEKNRNKQIQASIAKVFKRQSEALSKK 230

Query: 238 RRDTP--GAFAPRSQRNQRNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPP 295
           R+DTP   +F  RSQRNQRN+ SRRQNQ  DIQG                      TE  
Sbjct: 231 RKDTPSSSSFVTRSQRNQRNLQSRRQNQASDIQGSEENEENGNNERDSSSGDEG-GTELR 289

Query: 296 QRRRKRWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSN 355
           QR+RKRWTRVR SQPSSSMA PDGG ++SD+D++RENRGTSR V+K RKLTWGRGGFRSN
Sbjct: 290 QRKRKRWTRVRSSQPSSSMASPDGGSIESDLDINRENRGTSRLVTKARKLTWGRGGFRSN 349

Query: 356 TRHXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEFDVHLLLVSLDKSTPS-LEQPHLCC 414
           TR+              R+++LV +L++L+EN DEFDVHL+ VSLDK T   LE+ HLCC
Sbjct: 350 TRYGSGGGSNGKSSRSGRMSRLVDYLKNLNENTDEFDVHLMFVSLDKETTQRLEKLHLCC 409

Query: 415 RPTLTVKHLYEYVARQTPLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPH 474
           RP ++VK+LYEY+A QTPL VE VEI+AVKGC S N ++SAD+ S L  DEL++L IDP 
Sbjct: 410 RPNVSVKNLYEYIASQTPLTVEEVEILAVKGCSSANCDKSADEDSVLDFDELSSLVIDPQ 469

Query: 475 KDELEILQEHESLAEIRSKCISKRDHLILAYRQK 508
           KDELEILQ HE++AEIRSK I KR HLILAY++K
Sbjct: 470 KDELEILQAHETVAEIRSKSIFKRGHLILAYKRK 503


>Medtr2g090595.2 | RING zinc finger protein | HC |
           chr2:38732994-38739213 | 20130731
          Length = 433

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/311 (65%), Positives = 234/311 (75%), Gaps = 4/311 (1%)

Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
           +VYV + DIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 111 YVYVELSDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 170

Query: 178 RRSLRDDPNYDALIASLYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
           RRSLRDDPNYDALIA+LYP+I              KNRNKQIQASIAK+ +RQSEAL K+
Sbjct: 171 RRSLRDDPNYDALIATLYPNIEKYEEEELEFREEEKNRNKQIQASIAKVFKRQSEALSKK 230

Query: 238 RRDTP--GAFAPRSQRNQRNIHSRRQNQVIDIQGXXXXXXXXXXXXXXXXXXXXRCTEPP 295
           R+DTP   +F  RSQRNQRN+ SRRQNQ  DIQG                      TE  
Sbjct: 231 RKDTPSSSSFVTRSQRNQRNLQSRRQNQASDIQGSEENEENGNNERDSSSGDEG-GTELR 289

Query: 296 QRRRKRWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSN 355
           QR+RKRWTRVR SQPSSSMA PDGG ++SD+D++RENRGTSR V+K RKLTWGRGGFRSN
Sbjct: 290 QRKRKRWTRVRSSQPSSSMASPDGGSIESDLDINRENRGTSRLVTKARKLTWGRGGFRSN 349

Query: 356 TRHXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEFDVHLLLVSLDK-STPSLEQPHLCC 414
           TR+              R+++LV +L++L+EN DEFDVHL+ VSLDK +T  LE+ HLCC
Sbjct: 350 TRYGSGGGSNGKSSRSGRMSRLVDYLKNLNENTDEFDVHLMFVSLDKETTQRLEKLHLCC 409

Query: 415 RPTLTVKHLYE 425
           RP ++VK+LYE
Sbjct: 410 RPNVSVKNLYE 420


>Medtr4g088520.1 | E3 ubiquitin-protein ligase RING1a-like protein,
           putative | HC | chr4:35141489-35136880 | 20130731
          Length = 440

 Score =  271 bits (694), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 169/399 (42%), Positives = 224/399 (56%), Gaps = 34/399 (8%)

Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
           +V + + D+RK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 58  YVAIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 117

Query: 178 RRSLRDDPNYDALIASLYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKIVQRQSEALVKR 237
           RRSLRDDPNYDALIA++YPDI                R+KQ QASIA+ +QRQSEAL K+
Sbjct: 118 RRSLRDDPNYDALIAAIYPDIDKYEEEELALHEDEMTRHKQFQASIAQTLQRQSEALSKK 177

Query: 238 R--RDTPGAFAPRSQRNQRNIHSRRQNQV---IDIQGXXXXXXXXXXXXXXXXXXXXRCT 292
           R  + T  AF  RS+ N R  H RR+  +    D Q                       T
Sbjct: 178 RNAKATAAAFMRRSKGNYRTSHLRRRRNIRNAGDFQVSSDNNGMNDNDGEKDSSSDDGQT 237

Query: 293 EPPQRRRKRWTRVRPSQP-SSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGG 351
           E   RR K+        P  S+   PDG   ++  +V RE       +S    L+WG+ G
Sbjct: 238 ETQPRRCKKGAEQETQFPRHSASTDPDGIGDETPPEVHRE------IISASGTLSWGKNG 291

Query: 352 FRSNTRHXXXXXXXXXXXXXXRLAKLVGHLRSLDENIDEFDVHLLLVSLDKS-TPSLEQP 410
            RS++R               R++KLV HL SL  N  E  V L LVS D+   P+LE+ 
Sbjct: 292 HRSHSR------VNGKNAKNNRISKLVEHLSSLAANGYELPVFLKLVSFDEQRLPNLEES 345

Query: 411 HLCCRPTLTVKHLYEYVARQTPLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLA 470
            + C+PT++VK L ++VA +T LP   VE++ V               +++V  E T   
Sbjct: 346 CITCKPTMSVKELCKHVANETALPANEVELLLV-----------LKPRASIVGGEST--- 391

Query: 471 IDPHKDELEILQEHESLAEIRSKC-ISKRDHLILAYRQK 508
           I P +D L +L++ E+LAE+      +   +L++AY++K
Sbjct: 392 IGPDRDNLRVLEDQETLAELLGDYENTSYGYLVMAYKRK 430


>Medtr4g088520.2 | E3 ubiquitin-protein ligase RING1a-like protein,
           putative | HC | chr4:35140912-35136880 | 20130731
          Length = 355

 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/371 (40%), Positives = 199/371 (53%), Gaps = 34/371 (9%)

Query: 146 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIASLYPDIXXXXXXX 205
           MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIA++YPDI       
Sbjct: 1   MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAIYPDIDKYEEEE 60

Query: 206 XXXXXXXKNRNKQIQASIAKIVQRQSEALVKRR--RDTPGAFAPRSQRNQRNIHSRRQNQ 263
                    R+KQ QASIA+ +QRQSEAL K+R  + T  AF  RS+ N R  H RR+  
Sbjct: 61  LALHEDEMTRHKQFQASIAQTLQRQSEALSKKRNAKATAAAFMRRSKGNYRTSHLRRRRN 120

Query: 264 V---IDIQGXXXXXXXXXXXXXXXXXXXXRCTEPPQRRRKRWTRVRPSQP-SSSMAGPDG 319
           +    D Q                       TE   RR K+        P  S+   PDG
Sbjct: 121 IRNAGDFQVSSDNNGMNDNDGEKDSSSDDGQTETQPRRCKKGAEQETQFPRHSASTDPDG 180

Query: 320 GCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTRHXXXXXXXXXXXXXXRLAKLVG 379
              ++  +V RE       +S    L+WG+ G RS++R               R++KLV 
Sbjct: 181 IGDETPPEVHRE------IISASGTLSWGKNGHRSHSR------VNGKNAKNNRISKLVE 228

Query: 380 HLRSLDENIDEFDVHLLLVSLDKS-TPSLEQPHLCCRPTLTVKHLYEYVARQTPLPVEAV 438
           HL SL  N  E  V L LVS D+   P+LE+  + C+PT++VK L ++VA +T LP   V
Sbjct: 229 HLSSLAANGYELPVFLKLVSFDEQRLPNLEESCITCKPTMSVKELCKHVANETALPANEV 288

Query: 439 EIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKDELEILQEHESLAEIRSKC-ISK 497
           E++ V               +++V  E T   I P +D L +L++ E+LAE+      + 
Sbjct: 289 ELLLV-----------LKPRASIVGGEST---IGPDRDNLRVLEDQETLAELLGDYENTS 334

Query: 498 RDHLILAYRQK 508
             +L++AY++K
Sbjct: 335 YGYLVMAYKRK 345


>Medtr4g091110.1 | C3HC4-type RING zinc finger protein | LC |
           chr4:36070700-36067211 | 20130731
          Length = 252

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 58/70 (82%)

Query: 129 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 188
           +++CPIC GII+KT+T+ ECLHRFC ECI+K MR G NECP CRTHC  + SLRDDPNYD
Sbjct: 95  EIECPICFGIIRKTKTIRECLHRFCEECINKCMRFGKNECPVCRTHCPDQLSLRDDPNYD 154

Query: 189 ALIASLYPDI 198
           ALIA L PDI
Sbjct: 155 ALIALLCPDI 164


>Medtr6g080720.1 | C3HC4-type RING zinc finger protein | LC |
           chr6:29026452-29024545 | 20130731
          Length = 198

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 118 FVYVPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 177
           +V + + +I + ++CPIC GI++KT+T+ +CLHRFC ECI+K MR G NECP CRTHC +
Sbjct: 26  YVSIDLSNIHE-IECPICFGILRKTKTIRKCLHRFCGECIEKCMRSGKNECPICRTHCPT 84

Query: 178 RRSLRDDPNYDALIASLYPDI 198
           + SLRDDPNYDALIA L+PDI
Sbjct: 85  QLSLRDDPNYDALIALLHPDI 105


>Medtr4g058600.1 | zinc finger, C3HC4 type (RING finger) protein |
           LC | chr4:21548036-21547417 | 20130731
          Length = 78

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 146 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIASLYPDI 198
           MEC+HRFC+ CIDK MR G NECP CRTH  SRR+LRDDPNYDALIA++YP+I
Sbjct: 1   MECMHRFCKVCIDKCMRRGTNECPTCRTHFPSRRALRDDPNYDALIAAIYPNI 53


>Medtr7g056100.1 | hypothetical protein | LC |
           chr7:19495629-19503809 | 20130731
          Length = 163

 Score = 62.8 bits (151), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 18/126 (14%)

Query: 386 ENIDEFDVHLLLVSLDK-STPSLEQPHLCCRPTLTVKHLYEYVARQTPLPVEAVEIMAVK 444
           E  +E D+ + L+SL+K   P+LE+P   C+P   +   Y+Y+A +T L  E +E+  VK
Sbjct: 44  EKSNESDIFIKLLSLEKVKVPNLERPFFTCKPATLISQFYQYIAFETSLQTEEIELFVVK 103

Query: 445 GCCSTNRNESADDASALVCDELTTLAIDPHKDELEIL--QEHESLAEIRSKCISKRDHLI 502
            C   N N    DA+           +DP   + E L  +E  S AEI    +  R +L+
Sbjct: 104 EC---NPNIIFGDAN-----------LDPSNMKFEFLTREEETSFAEIIPNNLI-RGYLV 148

Query: 503 LAYRQK 508
           +AY++K
Sbjct: 149 IAYKKK 154


>Medtr2g018880.1 | breast cancer susceptibility-like protein,
           putative | HC | chr2:6018865-6024557 | 20130731
          Length = 1006

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 123 VQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 182
           ++ + ++++CPICLG++  +   + C H FC  CI KSM+  ++ CP C+    +RR +R
Sbjct: 4   LEKMGRELKCPICLGLLH-SAVSLTCNHLFCNSCIFKSMKSASS-CPVCKIP-FTRREVR 60

Query: 183 DDPNYDALIASLYPDI 198
             P+ D L+ ++Y ++
Sbjct: 61  PAPHIDNLV-TIYKNM 75