Miyakogusa Predicted Gene

Lj3g3v2576300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KZK7_SOYBN 1920 83.7 89.2 (tr|K7KZK7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G14120.2 1450 65.4 76.9 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252); Has 271 Blast hits to 268 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 69; Plants - 52; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr3:4677993-4685455 FORWARD LENGTH=1077
Medicago Medtr8g022010.1 1860 80.8 87.9 | nuclear pore protein | HC | chr8:7724079-7742774 | 20130731
Soybean Glyma07g04680.1 1604 89.9 94.8  
LJGI gnl|LJGI|TC67092 1130 100.0 100.0 similar to UniRef100_Q84ME0 Cluster: AT3g14120/MAG2_7; n=1; Arabidopsis thaliana|Rep: AT3g14120/MAG2_7 - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2576300.1 length: 1113 aa.
IPR007252 Nuclear pore protein 84/107
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006810 transport    
HMMPanther PTHR13003 NUP107-RELATED 3.6e-244 2-1113
HMMPfam PF04121 Nup84_Nup100 6.6e-38 256-670
no_ID  
Coil coil coiled-coil NA 73-94
HMMPanther PTHR13003:SF2 SUBFAMILY 3.6e-244 2-1113
Seg seg seg NA 1087-1102
Wolf-PSORT
Lj3g3v2576300.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2576300.1