Miyakogusa Predicted Gene
- Lj3g3v2576300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2576300.1 Non Chatacterized Hit- tr|I1KHE7|I1KHE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24087
PE,88.82,0,seg,NULL; Nup84_Nup100,Nuclear pore protein 84/107;
SUBFAMILY NOT NAMED,NULL; NUP107-RELATED,Nuclear,CUFF.44241.1
(3342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67092 similar to UniRef100_Q84ME0 Cluster: AT3g14120/... 1130 0.0
gnl|LJGI|TC63877 similar to UniRef100_Q84ME0 Cluster: AT3g14120/... 850 0.0
>gnl|LJGI|TC67092 similar to UniRef100_Q84ME0 Cluster: AT3g14120/MAG2_7; n=1;
Arabidopsis thaliana|Rep: AT3g14120/MAG2_7 - Arabidopsis
thaliana (Mouse-ear cress), partial (10%)
Length = 700
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus
Query: 1 atggaagactacgaaatggcaatggattcttctccctcacccagctacttcgacccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggaagactacgaaatggcaatggattcttctccctcacccagctacttcgacccacaa 190
Query: 61 gacctcaccactcgccagcagttccgccgttacgggaagaggcactcaacttcaggtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gacctcaccactcgccagcagttccgccgttacgggaagaggcactcaacttcaggtgct 250
Query: 121 tcaatccaacaagacaactcggcgtccaagttaagtcaaacggggctgttttatgacgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcaatccaacaagacaactcggcgtccaagttaagtcaaacggggctgttttatgacgga 310
Query: 181 caaagcatccatagtcctacaaatgccgcacttgttcttgaaaatattaaacaagaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caaagcatccatagtcctacaaatgccgcacttgttcttgaaaatattaaacaagaggtg 370
Query: 241 gagagtcttgatgctgattacttggaagaaagggcacaacattcctctagaaggaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gagagtcttgatgctgattacttggaagaaagggcacaacattcctctagaaggaggtta 430
Query: 301 tccgccgatgctcatggagtccctggtatggatgctggtttttactctgaacgccactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tccgccgatgctcatggagtccctggtatggatgctggtttttactctgaacgccactca 490
Query: 361 ttaaaggcgtgtaagcaagaggatgaatctgtaggagacggtgcagaaacagtatttacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttaaaggcgtgtaagcaagaggatgaatctgtaggagacggtgcagaaacagtatttacg 550
Query: 421 ttatatgcatctctgcttgattctgctttgcaaggattcatgcctattcctgatctgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttatatgcatctctgcttgattctgctttgcaaggattcatgcctattcctgatctgata 610
Query: 481 ctaagattcgagaatgcatgtcgagatgtttcagagtctatcaggtatggtttgaacgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctaagattcgagaatgcatgtcgagatgtttcagagtctatcaggtatggtttgaacgtt 670
Query: 541 aggcaccgagttgttgaggacaaattaatg 570
||||||||||||||||||||||||||||||
Sbjct: 671 aggcaccgagttgttgaggacaaattaatg 700
>gnl|LJGI|TC63877 similar to UniRef100_Q84ME0 Cluster: AT3g14120/MAG2_7; n=1;
Arabidopsis thaliana|Rep: AT3g14120/MAG2_7 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 663
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 2914 cgttgcttagcagtagctggtgatggaattggaccacatgatttcaatgatgggggtatt 2973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgttgcttagcagtagctggtgatggaattggaccacatgatttcaatgatgggggtatt 60
Query: 2974 cttggcaccattatggctgctggttttaaaggcgagcttcctcggtttcaagctggaatt 3033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttggcaccattatggctgctggttttaaaggcgagcttcctcggtttcaagctggaatt 120
Query: 3034 acaatggaaatatcccgattggatgcttggtattctgacaaaagtggtaccttggagtgc 3093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaatggaaatatcccgattggatgcttggtattctgacaaaagtggtaccttggagtgc 180
Query: 3094 ccggctacatacattgttaaaggactttgtcggaggtgctgtctccctgaagtcattctt 3153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggctacatacattgttaaaggactttgtcggaggtgctgtctccctgaagtcattctt 240
Query: 3154 cgtagcatgcaggtttctgtttctctcatgggatctggagttctacctgattgccatgac 3213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtagcatgcaggtttctgtttctctcatgggatctggagttctacctgattgccatgac 300
Query: 3214 actttggttgaactggttggcagtcctgaaactcagtttgttcacctgtttagtcaacag 3273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actttggttgaactggttggcagtcctgaaactcagtttgttcacctgtttagtcaacag 360
Query: 3274 cagttacaggaatttttattgtttgagagggaatactcaatctgcaaaatggagcttttg 3333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagttacaggaatttttattgtttgagagggaatactcaatctgcaaaatggagcttttg 420
Query: 3334 gaggaatga 3342
|||||||||
Sbjct: 421 gaggaatga 429