Miyakogusa Predicted Gene

Lj3g3v2576300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576300.1 Non Chatacterized Hit- tr|I1KHE7|I1KHE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24087
PE,88.82,0,seg,NULL; Nup84_Nup100,Nuclear pore protein 84/107;
SUBFAMILY NOT NAMED,NULL; NUP107-RELATED,Nuclear,CUFF.44241.1
         (1113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g04680.1                                                      1604   0.0  
Glyma07g04670.1                                                       296   1e-79
Glyma09g11810.1                                                       186   9e-47
Glyma16g01250.1                                                       146   2e-34

>Glyma07g04680.1 
          Length = 861

 Score = 1604 bits (4153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 762/848 (89%), Positives = 804/848 (94%), Gaps = 1/848 (0%)

Query: 240  WFFK-LTEELSKEKILVSDTSHVVACEFVAEDHAAQLFLRIVQWLEGLASKALDLEVKVR 298
            W +  LTEELSK++ILVS TSHVVACEFV EDH AQL LRIVQWLEGLASKALDLE KVR
Sbjct: 3    WLYSTLTEELSKDQILVSGTSHVVACEFVVEDHTAQLCLRIVQWLEGLASKALDLEAKVR 62

Query: 299  GSHVGSYLPNSGVWHHTQRYLKKGTSDMNIVHHLDFDAPTRENANLLPDDKKQDESLLED 358
            GSHVGSYLP+ GVWHHTQRYLKKG  DMN+VHHLDFDAPTRENANLLPDDKKQDESLLED
Sbjct: 63   GSHVGSYLPSCGVWHHTQRYLKKGNLDMNVVHHLDFDAPTRENANLLPDDKKQDESLLED 122

Query: 359  VWTLLRAGRLEEACGLCRSAGQPWRAASLCPFGGLSQFPSVEALVKNGKNRTLQAVEFES 418
            VW LLRAGRLEEACGLCRSAGQPWRA+SLCPFGGL+ FPSVEALVKNGKNRTLQAVEFES
Sbjct: 123  VWILLRAGRLEEACGLCRSAGQPWRASSLCPFGGLNTFPSVEALVKNGKNRTLQAVEFES 182

Query: 419  GIGHQWHLWKWASYCASEKIAEQGGKYEAAVYGAQCSNLKRMLPLCTDWESACWAMAKSW 478
            GIGHQWHLWKWAS+CASEKIA+QGGK EAAVY AQCSNLKRMLPLC DWESACWAMAKSW
Sbjct: 183  GIGHQWHLWKWASFCASEKIADQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSW 242

Query: 479  LDVQVDMEVTRSLPGGVDQLRAFGDVIDGSHGHVDGSLEPSNGPENWPIQVLNQQPRQLS 538
            LDVQVD+E+TRSLPGGVDQLR FGDVIDGS G+ DGS EPSNGPENWPIQVLNQQPRQLS
Sbjct: 243  LDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGNADGSFEPSNGPENWPIQVLNQQPRQLS 302

Query: 539  SLLQKLHSGEMIYETVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPSDDDQNVFRPH 598
            SLLQKLHSGEMI+E VTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAP++D+QNVFRP 
Sbjct: 303  SLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPS 362

Query: 599  GDPQMIRFGAHLVLVLRYLIADEIKGAFMDKIMSVGDHILHMYAMFLFSKEHEELVGIYA 658
            GDPQMIRFGAHLVLVLRYL+A+E+K  F DKI+SVGD+ILH+YA+FLFSKEHEELVGIYA
Sbjct: 363  GDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVGIYA 422

Query: 659  SQLARHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSEDDSKGNFEDIIESVLMR 718
            SQLARHRCIDLFVHMMELRLH+SVHVKYKIFLSAMEYLPFSS DDSKGNFEDII+ +L+R
Sbjct: 423  SQLARHRCIDLFVHMMELRLHNSVHVKYKIFLSAMEYLPFSSMDDSKGNFEDIIQRILLR 482

Query: 719  SREIKVGKYDSLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSN 778
            SREIKVGKYD+LSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRAL+HSN
Sbjct: 483  SREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALIHSN 542

Query: 779  ILFREFALISMWRVPGMPIGAHTALGFLAEPLKQLAETLETSEDDNIFEDLREFQDWREY 838
            ILFREF+LISMWRVP MPIGAHT LGFLAEPLKQLAETLETSED N+FEDLREFQDWREY
Sbjct: 543  ILFREFSLISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNVFEDLREFQDWREY 602

Query: 839  YSCDGTYRKWLKVELENAEVPVSELSLEEKERAVSAAKETLDASLSLLERKETPWLASID 898
            YSCD TYR WLK E+ENAEVP+SELSLEEKERA+SAAKETL ASLSLL+RKETPWLAS D
Sbjct: 603  YSCDATYRNWLKTEVENAEVPISELSLEEKERAISAAKETLSASLSLLKRKETPWLASTD 662

Query: 899  QTYESAEPVFLELHATAMLCLPSGECMCPDATVCTTLTSALYSSAGDEVVLNRQLTVNVS 958
              YESAEPVFLELHATAMLCLPSGEC+CPDATVCTTLTSALYSSAGDEVVLNRQL VNVS
Sbjct: 663  CMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVS 722

Query: 959  ISSRDNYCIDVVLRCLAVAGDGIGPHDFNDGGILGTIMAAGFKGELPRFQAGITMEISRL 1018
            ISSRD+YCIDVVLRCLA+AGDG+ PHD NDGGILGTIMAAGFKGELPRFQAG+TMEIS L
Sbjct: 723  ISSRDSYCIDVVLRCLAIAGDGLEPHDLNDGGILGTIMAAGFKGELPRFQAGVTMEISCL 782

Query: 1019 DAWYSDKSGTLECPATYIVKGLCRRCCLPEVILRSMQVSVSLMGSGVLPDCHDTLVELVG 1078
            DAWYSDK GTLECPATYIVKGLCRRCCLPEVILR MQVSVSLMGSGVLPDCHDTL+ELVG
Sbjct: 783  DAWYSDKDGTLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVG 842

Query: 1079 SPETQFVH 1086
            SPET F+H
Sbjct: 843  SPETDFLH 850


>Glyma07g04670.1 
          Length = 171

 Score =  296 bits (757), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 142/170 (83%), Positives = 157/170 (92%)

Query: 51  LSQTGLFYDGQSIHSPTNAALVLENIKQEVESLDADYLEERAQHSSRRRLSADAHGVPGM 110
           LS+TGL YDGQSIHSPTNAALVLENIKQEVESLDADYLEE+  +S+RR+LSA   GVPG+
Sbjct: 1   LSETGLLYDGQSIHSPTNAALVLENIKQEVESLDADYLEEKTPYSTRRKLSAVIDGVPGV 60

Query: 111 DAGFYSERHSLKACKQEDESVGDGAETVFTLYASLLDSALQGFMPIPDLILRFENACRDV 170
           DAGF S R+SLKACK E +S+GDGAET+FTL+ASLLDS+LQG MPI DLILR ENACR+V
Sbjct: 61  DAGFDSGRYSLKACKTEGDSLGDGAETIFTLFASLLDSSLQGLMPIADLILRVENACRNV 120

Query: 171 SESIRYGLNVRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLTL 220
           SESIRYGLN+RHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLT+
Sbjct: 121 SESIRYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLTI 170


>Glyma09g11810.1 
          Length = 248

 Score =  186 bits (473), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 140/274 (51%), Gaps = 66/274 (24%)

Query: 40  ASIQQDNSASKLSQTGLFYDGQSIHSPTNAALVLENIKQEVESLDADYLEERAQHSSRRR 99
           ASIQ DN ASK+S+ G+ YDGQ IHSP N ALVL+NIKQEV+SLD DYLEE+  +S+RR+
Sbjct: 1   ASIQHDNLASKISEIGMLYDGQRIHSPPNVALVLQNIKQEVKSLDVDYLEEKTPYSTRRK 60

Query: 100 LSADAHGVP---------------GMDAGFYSERHSLKACKQEDESVGDGAETVFTLYAS 144
           L AD HGVP                  +  Y     +  CK+       G          
Sbjct: 61  LFADIHGVPRWMLVLTLVTNWEMVQKQSLLYLHLCLILLCKKNSSPTLAGKIKGEMSEEE 120

Query: 145 LLDSALQGFMPIPDLILRFENACRDVSESIRY-GLNVRHRVVEDKLMRQKAQLLLDEAAT 203
                  G MPI DLILR ENACR+VSESIR+ GLN RHRVVE+K +RQKAQLLLDEAAT
Sbjct: 121 NSGERNSGLMPIADLILRVENACRNVSESIRFTGLNTRHRVVEEKFLRQKAQLLLDEAAT 180

Query: 204 WSLLWFLYGKGNISLTLDVQYFKNLLCLCPQLCYDIWFFKLTEELSKEKILVSDTSHVVA 263
           WSL W                         + C  +                    H   
Sbjct: 181 WSLFW-------------------------KTCTFL--------------------HRKT 195

Query: 264 CEFVAEDHAAQLFLRIVQWLEGLASKALDLEVKV 297
           C F+      + F  IVQWLEGLASK LDLE  V
Sbjct: 196 CTFL-----HRYFSPIVQWLEGLASKTLDLEANV 224


>Glyma16g01250.1 
          Length = 103

 Score =  146 bits (368), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/84 (80%), Positives = 71/84 (84%), Gaps = 4/84 (4%)

Query: 976  VAGDGIGPHDFNDGGILGTIMAAGFKG----ELPRFQAGITMEISRLDAWYSDKSGTLEC 1031
            +  DG+ PH  NDGGILGTIMAAGFKG    ELPRFQAG+TMEIS LDAWYSDK GTLEC
Sbjct: 1    ITDDGLEPHHLNDGGILGTIMAAGFKGTITGELPRFQAGVTMEISCLDAWYSDKDGTLEC 60

Query: 1032 PATYIVKGLCRRCCLPEVILRSMQ 1055
             ATYIVKGLCRRCCLPEVILR MQ
Sbjct: 61   RATYIVKGLCRRCCLPEVILRCMQ 84