Miyakogusa Predicted Gene
- Lj3g3v2576110.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SKR7_LOTJA |
449 |
99.5 |
99.5 |
(tr|I3SKR7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G17350.1 |
342 |
71.8 |
86.8 |
| Symbols: | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 | chr1:5942391-5944272 FORWARD LENGTH=227 |
| Medicago |
Medtr8g022330.1 |
414 |
89.5 |
95.9 |
| NADH dehydrogenase 1 alpha subcomplex, assembly factor 1 | HC | chr8:7919583-7915573 | 20130731 |
| Soybean |
Glyma16g01410.1 |
419 |
91.8 |
95.9 |
|
| LJGI |
gnl|LJGI|TC58161 |
1294 |
99.8 |
99.8 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2576110.1 |
length: 219 aa. |
| IPR008979 |
Galactose-binding domain-like |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF49785 |
Galactose-binding |
2.6e-28 |
31-219 |
| IPR013857 |
NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
| HMMPfam |
PF08547 |
CIA30 |
1.4e-44 |
35-216 |
| no_ID |
|
| HMMPanther |
PTHR13194 |
COMPLEX |
4.9e-91 |
1-219 |
| HMMPanther |
PTHR13194:SF7 |
COMPLEX |
4.9e-91 |
1-219 |
- Wolf-PSORT
Lj3g3v2576110.1 mito 5, chlo 4, cyto 2.5, cyto_nucl 2.5, cyto_mito 2.5, mito_plas 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2576110.1 |
|