Miyakogusa Predicted Gene
- Lj3g3v2576110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2576110.1 tr|C1EBJ0|C1EBJ0_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_108852,29.64,2e-18,CIA30,NADH:ubiquinone oxidoreductase
intermediate-associated protein 30; COMPLEX I
INTERMEDIATE-ASSO,CUFF.44224.1
(219 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g01410.1 419 e-118
Glyma07g04830.1 419 e-117
Glyma16g01410.2 241 4e-64
Glyma05g29330.3 68 9e-12
Glyma05g29330.2 68 9e-12
Glyma08g12480.1 65 8e-11
>Glyma16g01410.1
Length = 245
Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 210/219 (95%)
Query: 1 MSRLRRLFQSSMDATKRVISGSFDDLMPPPERYIFSFNSKQELSKWHLYSDSEYGGLSSA 60
MSRLRRL Q+S+DATK+VISG+ DDLMPPPER IFSFNSKQELSKWHLYSDSE+GGLSSA
Sbjct: 20 MSRLRRLIQASVDATKKVISGNLDDLMPPPERPIFSFNSKQELSKWHLYSDSEFGGLSSA 79
Query: 61 SLQITESENGQNSGIFSGNLSLDVTPGSKWNISRGGFCGMRSKKFDGFIDLDSYDTIAMK 120
SLQITESENG SGIFSGNLSLDV+ GSKWNI+R GFCGMRSKKFDGFIDLDSYDTIAMK
Sbjct: 80 SLQITESENGATSGIFSGNLSLDVSEGSKWNITRSGFCGMRSKKFDGFIDLDSYDTIAMK 139
Query: 121 LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVPKGNWYIAKIPLARYLPTWRGNVID 180
LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVP+GNWYI KIPLARYLPTWRGNVID
Sbjct: 140 LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVPEGNWYIMKIPLARYLPTWRGNVID 199
Query: 181 AEIEMNPSRVLGMSLSVNAEGGVPDARSGPGDFRVELDW 219
A+IEMNPSRVLGMSLSVNAEGGVP ARSGPGDFRVELDW
Sbjct: 200 AQIEMNPSRVLGMSLSVNAEGGVPGARSGPGDFRVELDW 238
>Glyma07g04830.1
Length = 226
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 210/219 (95%)
Query: 1 MSRLRRLFQSSMDATKRVISGSFDDLMPPPERYIFSFNSKQELSKWHLYSDSEYGGLSSA 60
MSRLRRL Q+S+DATK+VISG+ DDLMPPPER IFSFNSKQELSKWHLYSDSE+GGLSSA
Sbjct: 1 MSRLRRLIQASVDATKKVISGNLDDLMPPPERPIFSFNSKQELSKWHLYSDSEFGGLSSA 60
Query: 61 SLQITESENGQNSGIFSGNLSLDVTPGSKWNISRGGFCGMRSKKFDGFIDLDSYDTIAMK 120
SLQITESENG SGIFSGNLSLDV+ GSKWNI+R GFCGMRSKKFDGFIDLDSYDTIAMK
Sbjct: 61 SLQITESENGATSGIFSGNLSLDVSEGSKWNITRSGFCGMRSKKFDGFIDLDSYDTIAMK 120
Query: 121 LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVPKGNWYIAKIPLARYLPTWRGNVID 180
LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVP+GNWYI KIPLARYLPTWRGNVID
Sbjct: 121 LKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVPEGNWYITKIPLARYLPTWRGNVID 180
Query: 181 AEIEMNPSRVLGMSLSVNAEGGVPDARSGPGDFRVELDW 219
A+IEMNPSRVLGMSLSVNAEGGVP ARSGPGDFRVELDW
Sbjct: 181 AQIEMNPSRVLGMSLSVNAEGGVPGARSGPGDFRVELDW 219
>Glyma16g01410.2
Length = 179
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/131 (89%), Positives = 124/131 (94%)
Query: 1 MSRLRRLFQSSMDATKRVISGSFDDLMPPPERYIFSFNSKQELSKWHLYSDSEYGGLSSA 60
MSRLRRL Q+S+DATK+VISG+ DDLMPPPER IFSFNSKQELSKWHLYSDSE+GGLSSA
Sbjct: 20 MSRLRRLIQASVDATKKVISGNLDDLMPPPERPIFSFNSKQELSKWHLYSDSEFGGLSSA 79
Query: 61 SLQITESENGQNSGIFSGNLSLDVTPGSKWNISRGGFCGMRSKKFDGFIDLDSYDTIAMK 120
SLQITESENG SGIFSGNLSLDV+ GSKWNI+R GFCGMRSKKFDGFIDLDSYDTIAMK
Sbjct: 80 SLQITESENGATSGIFSGNLSLDVSEGSKWNITRSGFCGMRSKKFDGFIDLDSYDTIAMK 139
Query: 121 LKGDGRCYIST 131
LKGDGRCYIST
Sbjct: 140 LKGDGRCYIST 150
>Glyma05g29330.3
Length = 475
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 16 KRVISGSFDDLMPPPERYIFSF--NSKQELSKWHLYSDSEYGGLSSASLQITES--ENGQ 71
+ +I D+L E+ +F F N+ ++L W D GG+S ++ QI S ENG
Sbjct: 119 RNLIKAVKDNLGLRREKLLFGFEGNNYRQLP-WGALDDVVMGGVSESTFQIDPSGGENGG 177
Query: 72 NSGIFSGNLSLDVTPGSKWNISRGGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGRCYIST 131
+GIF G +S + GGF +R+K F +L +YD + +LKGDGR Y
Sbjct: 178 PTGIFKGVVS---------TANNGGFTSIRTKNFSEPENLSAYDGLEFRLKGDGRRYKII 228
Query: 132 IYTENWVNSPGQMEDNSWQAFVYVP-----KGNWYIAKIPLARYLPTWRGNVIDAEIEMN 186
+ T + W A Y KG W ++P + P +R + +
Sbjct: 229 VRTS-----------SDWDALGYTAGFDTEKGKWQSIRVPFSSLRPVFRARTVSDAPPFD 277
Query: 187 PSRVLGMS 194
PS VL S
Sbjct: 278 PSIVLMFS 285
>Glyma05g29330.2
Length = 475
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 16 KRVISGSFDDLMPPPERYIFSF--NSKQELSKWHLYSDSEYGGLSSASLQITES--ENGQ 71
+ +I D+L E+ +F F N+ ++L W D GG+S ++ QI S ENG
Sbjct: 119 RNLIKAVKDNLGLRREKLLFGFEGNNYRQLP-WGALDDVVMGGVSESTFQIDPSGGENGG 177
Query: 72 NSGIFSGNLSLDVTPGSKWNISRGGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGRCYIST 131
+GIF G +S + GGF +R+K F +L +YD + +LKGDGR Y
Sbjct: 178 PTGIFKGVVS---------TANNGGFTSIRTKNFSEPENLSAYDGLEFRLKGDGRRYKII 228
Query: 132 IYTENWVNSPGQMEDNSWQAFVYVP-----KGNWYIAKIPLARYLPTWRGNVIDAEIEMN 186
+ T + W A Y KG W ++P + P +R + +
Sbjct: 229 VRTS-----------SDWDALGYTAGFDTEKGKWQSIRVPFSSLRPVFRARTVSDAPPFD 277
Query: 187 PSRVLGMS 194
PS VL S
Sbjct: 278 PSIVLMFS 285
>Glyma08g12480.1
Length = 600
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 46 WHLYSDSEYGGLSSASLQITES--ENGQNSGIFSGNLSLDVTPGSKWNISRGGFCGMRSK 103
W D GG+S ++ QI S ENG +G+F G +S + GGF +R+K
Sbjct: 272 WGALDDVVMGGVSESTFQIDPSGGENGGPTGVFKGVVS---------TANNGGFTSIRTK 322
Query: 104 KFDGFIDLDSYDTIAMKLKGDGRCYISTIYTENWVNSPGQMEDNSWQAFVYVPKGNWYIA 163
F +L +YD + +LKGDGR Y + T + ++ G + A KG W
Sbjct: 323 NFSEPENLSAYDGLEFRLKGDGRRYKIIVRTSSDWDTLG------YTAGFDTEKGKWQSI 376
Query: 164 KIPLARYLPTWRGNVIDAEIEMNPSRVLGMSL 195
++P + P +R + +PS V+ + L
Sbjct: 377 QVPFSSLSPVFRARTVSNAPPFDPSIVVSLQL 408