Miyakogusa Predicted Gene

Lj3g3v1684640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M508_SOYBN 311 65.0 69.3 (tr|I1M508) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G19350.2 184 47.9 55.6 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=421
Medicago Medtr2g097960.1 305 62.7 68.8 | polyadenylate-binding protein RBP47B | HC | chr2:41853094-41847353 | 20130731
Soybean Glyma13g41500.1 311 65.0 69.3  
LJGI gnl|LJGI|TC74380 1247 99.4 99.4 similar to UniRef100_A7NZS1 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1684640.1 length: 251 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 8.8e-17 66-130
HMMSmart SM00360 RNA 8.9e-20 65-132
ProfileScan PS50102 RRM 18.137 64-136
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 7.2e-24 2-142
no_ID  
HMMPanther PTHR24012 FAMILY 9.8e-66 1-228
HMMPanther PTHR24012:SF55 SUBFAMILY 9.8e-66 1-228
Seg seg seg NA 18-47
120-131
181-192
superfamily SSF54928 RNA-binding 4.4e-27 29-168
Wolf-PSORT
Lj3g3v1684640.1	nucl 5, cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1684640.1