Miyakogusa Predicted Gene

Lj3g3v0463680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JJK5_MEDTR 355 53.9 64.1 (tr|G7JJK5) RING finger protein OS=Medicago truncatula GN=MTR_4g029440 PE=4 SV=1
TAIR_pep AT2G44410.1 157 55.5 73.1 | Symbols: | RING/U-box superfamily protein | chr2:18328873-18330114 FORWARD LENGTH=413
Medicago Medtr4g029440.2 357 54.1 64.2 | zinc finger, C3HC4 type (RING finger) protein | HC | chr4:10176191-10172035 | 20130731
Soybean Glyma12g36960.1 337 50.0 59.8  
LJGI gnl|LJGI|AV424688 809 99.8 99.8 weakly similar to UniRef100_A7QRA0 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0463680.1 length: 402 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 1.6e-08 120-160
ProfileScan PS50089 ZF_RING_2 12.666 120-161
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.6e-15 115-173
no_ID  
HMMPanther PTHR12313 RNF5 3.4e-40 25-218
HMMPfam PF13923 zf-C3HC4_2 1.5e-11 118-161
Seg seg seg NA 69-88
342-354
superfamily SSF57850 RING/U-box 4.6e-14 115-176
Wolf-PSORT
Lj3g3v0463680.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0463680.1