Miyakogusa Predicted Gene

Lj2g3v2183130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KDC0_MEDTR 693 76.2 83.4 (tr|G7KDC0) E3 ubiquitin-protein ligase synoviolin B OS=Medicago truncatula GN=MTR_5g068460 PE=4 SV=1
TAIR_pep AT5G01960.1 554 62.0 73.7 | Symbols: | RING/U-box superfamily protein | chr5:370811-372775 FORWARD LENGTH=426
Medicago Medtr5g068460.1 693 76.2 83.4 | zinc finger, C3HC4 type (RING finger) protein | HC | chr5:28979430-28987791 | 20130731
Soybean Glyma06g14590.1 574 65.1 72.3  
LJGI gnl|LJGI|TC67304 2018 100.0 100.0 similar to UniRef100_A7Q9V6 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2183130.1 length: 485 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.2e-12 423-463
HMMSmart SM00184 Ring 8.8e-08 424-461
ProfileScan PS50089 ZF_RING_2 13.876 424-462
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2e-17 422-471
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 439-448
no_ID  
HMMPanther PTHR15860 UNCHARACTERIZED 6.1e-118 180-485
HMMPanther PTHR15860:SF0 SUBFAMILY 6.1e-118 180-485
Seg seg seg NA 15-36
160-173
superfamily SSF57850 RING/U-box 2e-18 417-485
Wolf-PSORT
Lj2g3v2183130.1	cyto 5, nucl 3, pero 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2183130.1