Miyakogusa Predicted Gene
- Lj2g3v1144100.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J6J3_SOYBN |
261 |
89.3 |
95.0 |
(tr|I1J6J3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G68260.1 |
233 |
75.7 |
87.9 |
| Symbols: | Thioesterase superfamily protein | chr1:25585976-25587601 REVERSE LENGTH=190 |
| Medicago |
Medtr5g056390.1 |
261 |
87.1 |
93.6 |
| pollen thioesterase | HC | chr5:23220063-23224362 | 20130731 |
| Soybean |
Glyma01g19200.2 |
261 |
89.3 |
95.0 |
|
| LJGI |
gnl|LJGI|TC62178 |
837 |
99.8 |
99.8 |
similar to UniRef100_A7P397 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1144100.1 |
length: 140 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.10.129.10 |
no description |
2.7e-45 |
2-137 |
| HMMPanther |
PTHR31793 |
FAMILY |
5.5e-67 |
1-140 |
| HMMPfam |
PF13279 |
4HBT_2 |
9.1e-13 |
11-130 |
| superfamily |
SSF54637 |
Thioesterase/thiol |
2e-36 |
1-140 |
- Wolf-PSORT
Lj2g3v1144100.1 cyto 10, cysk 2, golg 1, cysk_nucl 1, E.R._vacu 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1144100.1 |
|