Miyakogusa Predicted Gene

Lj2g3v1144100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1144100.1 NODE_40488_length_988_cov_15.061741.path2.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g19200.2                                                       261   2e-70
Glyma01g19200.1                                                       251   2e-67

>Glyma01g19200.2 
          Length = 204

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/140 (89%), Positives = 133/140 (95%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MSGF DVELKVRDYELD +GVVNNAVYASYCQHGRHELL+ IGINCDAVARSG+ALAL+E
Sbjct: 65  MSGFHDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLQNIGINCDAVARSGDALALSE 124

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           LSLKFL+PLRSGDKFVV+VRISGSSAARLYFDHFIYKL NQEP+LEAKA AVWLDKNYRP
Sbjct: 125 LSLKFLAPLRSGDKFVVRVRISGSSAARLYFDHFIYKLPNQEPILEAKAIAVWLDKNYRP 184

Query: 121 IRIPADMKSKIVKFIRNEDS 140
           IRIPA+MKSK VKFIR EDS
Sbjct: 185 IRIPAEMKSKFVKFIRIEDS 204


>Glyma01g19200.1 
          Length = 219

 Score =  251 bits (640), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/155 (80%), Positives = 133/155 (85%), Gaps = 15/155 (9%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MSGF DVELKVRDYELD +GVVNNAVYASYCQHGRHELL+ IGINCDAVARSG+ALAL+E
Sbjct: 65  MSGFHDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLQNIGINCDAVARSGDALALSE 124

Query: 61  LSLKFLSPLR---------------SGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVL 105
           LSLKFL+PLR               SGDKFVV+VRISGSSAARLYFDHFIYKL NQEP+L
Sbjct: 125 LSLKFLAPLRFCFPIFVLIIRTCNQSGDKFVVRVRISGSSAARLYFDHFIYKLPNQEPIL 184

Query: 106 EAKATAVWLDKNYRPIRIPADMKSKIVKFIRNEDS 140
           EAKA AVWLDKNYRPIRIPA+MKSK VKFIR EDS
Sbjct: 185 EAKAIAVWLDKNYRPIRIPAEMKSKFVKFIRIEDS 219