Miyakogusa Predicted Gene

Lj2g3v1144100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1144100.1 NODE_40488_length_988_cov_15.061741.path2.1
         (140 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68260.1 | Symbols:  | Thioesterase superfamily protein | chr...   233   3e-62
AT1G68280.1 | Symbols:  | Thioesterase superfamily protein | chr...   215   7e-57
AT1G35290.1 | Symbols:  | Thioesterase superfamily protein | chr...   204   1e-53
AT1G35250.1 | Symbols:  | Thioesterase superfamily protein | chr...   199   5e-52

>AT1G68260.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:25585976-25587601 REVERSE LENGTH=190
          Length = 190

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 106/140 (75%), Positives = 123/140 (87%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MS F +VELKVRDYELD FGVVNNAVYA+YCQHGRHE LE IGINCD VARSG ALA++E
Sbjct: 50  MSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGRHEFLESIGINCDEVARSGEALAISE 109

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           L++KFLSPLRSGDKFVVK RISG+SAAR+YFDHFI+KL NQEP+LEAK  AVWLD  YRP
Sbjct: 110 LTMKFLSPLRSGDKFVVKARISGTSAARIYFDHFIFKLPNQEPILEAKGIAVWLDNKYRP 169

Query: 121 IRIPADMKSKIVKFIRNEDS 140
           +RIP+ ++SK V F+R +D+
Sbjct: 170 VRIPSSIRSKFVHFLRQDDA 189


>AT1G68280.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:25592467-25593595 REVERSE LENGTH=188
          Length = 188

 Score =  215 bits (548), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 100/140 (71%), Positives = 117/140 (83%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MS F +VELKVRDYELD FGVVNNAVYA+YCQHG HE LE IGINCD VARSG ALA++E
Sbjct: 48  MSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGMHEFLESIGINCDEVARSGEALAISE 107

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           L++ FL+PLRSGDKFVVKV IS +SAAR+YFDH I KL NQE +LEAKAT VWLD  +RP
Sbjct: 108 LTMNFLAPLRSGDKFVVKVNISRTSAARIYFDHSILKLPNQEVILEAKATVVWLDNKHRP 167

Query: 121 IRIPADMKSKIVKFIRNEDS 140
           +RIP+ ++SK V F+R  D+
Sbjct: 168 VRIPSSIRSKFVHFLRQNDT 187


>AT1G35290.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:12947760-12948778 REVERSE LENGTH=189
          Length = 189

 Score =  204 bits (519), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 113/137 (82%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           M+G  ++ELKVRDYELD FGVVNNAVYA+YCQHG+HE +E IGINCD V+RSG ALA++E
Sbjct: 48  MNGVHEIELKVRDYELDQFGVVNNAVYANYCQHGQHEFMETIGINCDEVSRSGEALAVSE 107

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           L++KFL+PLRSG KFVVK RISG+S  R+YF+ FI+KL NQEP+LEAK  AVWLDK YRP
Sbjct: 108 LTIKFLAPLRSGCKFVVKTRISGTSMTRIYFEQFIFKLPNQEPILEAKGMAVWLDKRYRP 167

Query: 121 IRIPADMKSKIVKFIRN 137
           + IP+ ++S    F R 
Sbjct: 168 VCIPSYIRSNFGHFQRQ 184


>AT1G35250.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:12933046-12934465 REVERSE LENGTH=188
          Length = 188

 Score =  199 bits (506), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 110/134 (82%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           + GF ++ELKVRDYELD FGVVNNAVYA+YCQHGRHE ++ IGINC+ V+RSG ALA+ E
Sbjct: 48  IGGFHEIELKVRDYELDQFGVVNNAVYANYCQHGRHEFMDSIGINCNEVSRSGGALAIPE 107

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           L++KFL+PLRSG +FVVK RISG S  R+YF+ FI+KL NQEP+LEAK TAVWLD  YRP
Sbjct: 108 LTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFKLPNQEPILEAKGTAVWLDNKYRP 167

Query: 121 IRIPADMKSKIVKF 134
            R+P+ ++S    F
Sbjct: 168 TRVPSHVRSYFGHF 181