Miyakogusa Predicted Gene

Lj2g3v1144100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1144100.1 NODE_40488_length_988_cov_15.061741.path2.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g056390.1 | pollen thioesterase | HC | chr5:23220063-23224...   261   1e-70
Medtr5g056230.1 | pollen thioesterase | HC | chr5:23171809-23178...   199   1e-51
Medtr5g056390.2 | pollen thioesterase | HC | chr5:23220063-23224...   128   2e-30
Medtr5g056300.1 | thioesterase-like protein, putative | LC | chr...    83   9e-17

>Medtr5g056390.1 | pollen thioesterase | HC | chr5:23220063-23224362
           | 20130731
          Length = 212

 Score =  261 bits (667), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 131/140 (93%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MSGF DVELKVRDYELD FGVVNN+VYA YCQHGRHE LE IGINCDAVAR G+ALAL+E
Sbjct: 73  MSGFCDVELKVRDYELDQFGVVNNSVYAGYCQHGRHEFLESIGINCDAVARCGDALALSE 132

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           LS KFL+PLRSGD+FVVKVR+SGSSAAR+YFDHFIYKL NQEP+LEAKATAVWLDKNYRP
Sbjct: 133 LSFKFLAPLRSGDRFVVKVRVSGSSAARIYFDHFIYKLPNQEPILEAKATAVWLDKNYRP 192

Query: 121 IRIPADMKSKIVKFIRNEDS 140
           IRIPAD+KSK VKFIRNEDS
Sbjct: 193 IRIPADIKSKFVKFIRNEDS 212


>Medtr5g056230.1 | pollen thioesterase | HC | chr5:23171809-23178336
           | 20130731
          Length = 212

 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 111/140 (79%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           M  F DVELKVRDYE+D +GVVNNAVYA+YCQH   E  + IGIN   V RSG+A+AL+ 
Sbjct: 73  MCEFYDVELKVRDYEVDRYGVVNNAVYANYCQHCGDEFFKSIGINFADVIRSGDAMALSN 132

Query: 61  LSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAKATAVWLDKNYRP 120
           LSLKFL+PLRSGDKFVV+VRISG SAARLY D FIYKL N +PVLEAK T V LDKNYRP
Sbjct: 133 LSLKFLAPLRSGDKFVVRVRISGISAARLYLDQFIYKLPNHKPVLEAKTTVVRLDKNYRP 192

Query: 121 IRIPADMKSKIVKFIRNEDS 140
           +RI  DMKSKI K I  +DS
Sbjct: 193 LRISEDMKSKIFKCIGGDDS 212


>Medtr5g056390.2 | pollen thioesterase | HC | chr5:23220063-23224362
           | 20130731
          Length = 159

 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 63/70 (90%)

Query: 1   MSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAVARSGNALALTE 60
           MSGF DVELKVRDYELD FGVVNN+VYA YCQHGRHE LE IGINCDAVAR G+ALAL+E
Sbjct: 73  MSGFCDVELKVRDYELDQFGVVNNSVYAGYCQHGRHEFLESIGINCDAVARCGDALALSE 132

Query: 61  LSLKFLSPLR 70
           LS KFL+PLR
Sbjct: 133 LSFKFLAPLR 142


>Medtr5g056300.1 | thioesterase-like protein, putative | LC |
          chr5:23191934-23192408 | 20130731
          Length = 74

 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 3/66 (4%)

Query: 13 DYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAV-ARSGNALALTELSLKFLSPLR- 70
          DYELD +GVV+N+ YA YCQ GRHE L+ IGINCD + A SG+A A++ELSLKF+ PLR 
Sbjct: 5  DYELDQYGVVHNS-YACYCQQGRHEFLKSIGINCDDILAASGDAFAISELSLKFIGPLRV 63

Query: 71 SGDKFV 76
          S  KFV
Sbjct: 64 SHAKFV 69