Miyakogusa Predicted Gene

Lj1g3v2482390.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3T8_LOTJA 410 99.5 99.5 (tr|I3T3T8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G08740.1 312 74.0 89.6 | Symbols: | elongation factor P (EF-P) family protein | chr3:2654788-2656154 REVERSE LENGTH=236
Medicago Medtr7g073250.1 324 82.6 93.5 | elongation factor P (EF-P), putative | HC | chr7:27354652-27359319 | 20130731
Soybean Glyma18g44620.1 367 85.6 95.0  
LJGI gnl|LJGI|TC64699 1390 100.0 100.0 similar to UniRef100_A7QFN9 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2482390.2 length: 236 aa.
IPR001059 Translation elongation factor P/YeiP, central
method AccNumber shortName E-value location
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006414 translational elongation    
HMMPfam PF01132 EFP 2.4e-21 121-172
IPR008991 Translation protein SH3-like domain
superfamily SSF50104 Translation 4.6e-19 45-114
IPR011768 Translation elongation factor P
Molecular Function GO:0003746 translation elongation factor activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006414 translational elongation    
HAMAP MF_00141 EF_P 45.786 52-236
HMMTigr TIGR00038 efp: 2e-72 54-236
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 9.3e-27 116-177
179-236
superfamily SSF50249 Nucleic 2.6e-19 116-180
179-236
IPR013185 Translation elongation factor, KOW-like
HMMPfam PF08207 EFP_N 8.9e-27 55-110
IPR013852 Translation elongation factor P/YeiP, conserved site
PatternScan PS01275 EFP NA 201-220
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 3.7e-30 54-114
IPR015365 Elongation factor P, C-terminal
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0043043 peptide biosynthetic process    
HMMPfam PF09285 Elong-fact-P_C 4.9e-24 180-235
HMMSmart SM00841 Elongation 2.2e-30 180-235
no_ID  
HMMPanther PTHR30053 ELONGATION 4.2e-78 50-236
Seg seg seg NA 9-36
Wolf-PSORT
Lj1g3v2482390.2	chlo 11, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2482390.2