Miyakogusa Predicted Gene

Lj1g3v2482390.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2482390.2 Non Chatacterized Hit- tr|I3T3T8|I3T3T8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.13,0,EF_P,Translation elongation factor P; EFP,Translation
elongation factor P/YeiP, conserved site; no d,CUFF.29054.2
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44620.1                                                       367   e-102
Glyma09g41150.1                                                       367   e-102
Glyma04g14630.1                                                        65   5e-11

>Glyma18g44620.1 
          Length = 233

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/201 (85%), Positives = 191/201 (95%), Gaps = 1/201 (0%)

Query: 37  PMRNPSS-KPRFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNY 95
           PMR PSS KPRF +IYALTSNDIKVG+N+EVDGAPWRVL FLHVKPGKGAAFVRTK+KNY
Sbjct: 33  PMRTPSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVLGFLHVKPGKGAAFVRTKMKNY 92

Query: 96  LTGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMDLNSYEEVRLDEKDIGDRTKW 155
           +TGNTV+KTFRAGSS+EQAD+ KETKQFTYKDG+QFVFMDL++YEE RL EK+IGDRTKW
Sbjct: 93  ITGNTVEKTFRAGSSVEQADVFKETKQFTYKDGAQFVFMDLDTYEEFRLGEKEIGDRTKW 152

Query: 156 LKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPL 215
           LKEGMDC++LLWNGKVID++LPIT+KL VVDVDPGLKGDTAQGG+KPATLDTGAVVNVPL
Sbjct: 153 LKEGMDCNLLLWNGKVIDVELPITIKLAVVDVDPGLKGDTAQGGTKPATLDTGAVVNVPL 212

Query: 216 FVNVGDEILVDTRNGVYMSRA 236
           FVNVGDEILVD+R G YMSRA
Sbjct: 213 FVNVGDEILVDSRTGQYMSRA 233


>Glyma09g41150.1 
          Length = 237

 Score =  367 bits (941), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/201 (86%), Positives = 190/201 (94%), Gaps = 2/201 (0%)

Query: 38  MRNPSS--KPRFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNY 95
           MR PSS  KPRF +IYALTSNDIKVG+N+EVDGAPWRVLEFLHVKPGKGAAFVRTK+KNY
Sbjct: 37  MRTPSSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKMKNY 96

Query: 96  LTGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMDLNSYEEVRLDEKDIGDRTKW 155
           +TGNTV+KTFRAGSSIEQAD+ KETKQFTYKDG QFVFMDLN+YEE RL EK+IGDRTKW
Sbjct: 97  ITGNTVEKTFRAGSSIEQADVFKETKQFTYKDGVQFVFMDLNTYEEFRLGEKEIGDRTKW 156

Query: 156 LKEGMDCSILLWNGKVIDIDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPL 215
           LKEGMDC++LLWNGKVID++LPIT+KLTVVDVDPGLKGDTAQGG+KPATLDT AVVNVPL
Sbjct: 157 LKEGMDCNLLLWNGKVIDVELPITIKLTVVDVDPGLKGDTAQGGTKPATLDTSAVVNVPL 216

Query: 216 FVNVGDEILVDTRNGVYMSRA 236
           FVNVGDEILVD+R G YMSRA
Sbjct: 217 FVNVGDEILVDSRTGQYMSRA 237


>Glyma04g14630.1 
          Length = 244

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 7/185 (3%)

Query: 53  LTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYLTGNTVDKTFRAGSSIE 112
           ++ +DIKVG+ +   G  + VL+  H   G+G A ++ +L++   GN V +       +E
Sbjct: 64  VSGSDIKVGNIIGKQGHFYEVLKVDHSHEGRGKATIKVELRDIDQGNKVTQRMGTDEDVE 123

Query: 113 QADILKETKQFTYKDGS-QFVFMDLNSYEEVRLDEKDIGDRTKWLKEGMDCSILLWNGKV 171
           +  + ++T  F   D     V MD ++ +++ + +        +L++ M   +  ++ K 
Sbjct: 124 RVYVQEKTFMFMCMDSDGTVVLMDPDTLDQIEVSKDLFNKDCLYLRDEMKVKVHFYDDKP 183

Query: 172 IDIDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNVGDEILVDTRNGV 231
           +   +P  V   V +         A   +K   LD G  V VP  +  GD I+V T +  
Sbjct: 184 LSASVPKRVTCIVKE------AIAATSRNKKVVLDNGLTVEVPSHIVAGDAIVVSTEHDS 237

Query: 232 YMSRA 236
           Y+ RA
Sbjct: 238 YIERA 242