Miyakogusa Predicted Gene

Lj1g3v2482390.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2482390.2 Non Characterized Hit- tr|I3T3T8|I3T3T8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.13,0,EF_P,Translation elongation factor P; EFP,Translation
elongation factor P/YeiP, conserved site; no d,CUFF.29054.2
         (236 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g073250.1 | elongation factor P (EF-P), putative | HC | ch...   324   4e-89
Medtr3g083530.1 | elongation factor P, putative | HC | chr3:3768...    74   2e-13

>Medtr7g073250.1 | elongation factor P (EF-P), putative | HC |
           chr7:27354652-27359319 | 20130731
          Length = 233

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 166/201 (82%), Positives = 188/201 (93%), Gaps = 2/201 (0%)

Query: 37  PMRNPSSKPRFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYL 96
           P+R PS KP F KIYAL+SNDIKVG+N+EVDG+P RVLEFLHVKPGKGAAFVRTKLKN+L
Sbjct: 34  PIRTPS-KPHFLKIYALSSNDIKVGTNIEVDGSPMRVLEFLHVKPGKGAAFVRTKLKNHL 92

Query: 97  TGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMDLNSYEEVRLDEKDIGDRTKWL 156
           TGNTV+KTFRAGSSI++ADI+KETKQFTYKDG QFVFMDL++YEE RLDE D+G++TKWL
Sbjct: 93  TGNTVEKTFRAGSSIDEADIVKETKQFTYKDGVQFVFMDLSTYEETRLDESDVGNKTKWL 152

Query: 157 KEGMDCSILLWNGKVIDIDLPITVKLTVVDVDPGLKGDTAQ-GGSKPATLDTGAVVNVPL 215
           KEGMDC++LLWNGKVID+DLPITVKL VVDV P +KGDTAQ GGSKPATLDTGA+VNVPL
Sbjct: 153 KEGMDCNLLLWNGKVIDVDLPITVKLKVVDVVPVVKGDTAQGGGSKPATLDTGAIVNVPL 212

Query: 216 FVNVGDEILVDTRNGVYMSRA 236
           FVNVG+EILVDTR+G YMSRA
Sbjct: 213 FVNVGEEILVDTRSGQYMSRA 233


>Medtr3g083530.1 | elongation factor P, putative | HC |
           chr3:37688328-37697647 | 20130731
          Length = 242

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 53  LTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAFVRTKLKNYLTGNTVDKTFRAGSSIE 112
           +  +DI+VG  +   G  + VL+  H   G+G A ++ +L + + G  V +        E
Sbjct: 62  IVGSDIRVGKKIGKQGRIYEVLKVDHSHEGRGKATLKVELLDIIQGTKVSQRIATDDEFE 121

Query: 113 QADILKETKQFTY----KDGSQFVFMDLNSYEEVRLDEKDIGDRTKWLKEGMDCSILLWN 168
           +A I  + K F Y    +DG+  V MD ++ +++ + ++  G    ++++ M   +  ++
Sbjct: 122 KAYI--QEKNFMYMCTDQDGT-VVLMDTDTLDQIEVSKELFGKNCLYIQDEMKVKVQFYD 178

Query: 169 GKVIDIDLPITVKLTVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFVNVGDEILVDTR 228
            K I   +P  V  TV +V        A   +K  TLD G  + VP  +  GD ILV+T 
Sbjct: 179 DKPISATVPKRVICTVKEVI------AATPRNKKVTLDNGPTIEVPPHIVAGDAILVNTE 232

Query: 229 NGVYMSRA 236
           +  Y+ RA
Sbjct: 233 DDCYIERA 240