Miyakogusa Predicted Gene

Lj0g3v0348469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LQK6_SOYBN 375 74.4 79.8 (tr|I1LQK6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G46870.1 304 70.9 84.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:17263011-17264022 FORWARD LENGTH=257
Medicago Medtr4g064917.1 368 82.8 89.3 | PPR containing plant-like protein | HC | chr4:24262873-24265661 | 20130731
Soybean Glyma11g14330.1 373 74.0 79.5  
LJGI gnl|LJGI|TC67415 1025 98.7 98.7 similar to UniRef100_A7NY31 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0348469.1 length: 258 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 4.9e-08 142-189
HMMTigr TIGR00756 PPR: 0.0028 149-178
181-207
ProfileScan PS51375 PPR 9.788 143-177
178-212
no_ID  
HMMPanther PTHR24015 FAMILY 2.8e-96 2-258
HMMPanther PTHR24015:SF92 SUBFAMILY 2.8e-96 2-258
Seg seg seg NA 27-37
220-230
Wolf-PSORT
Lj0g3v0348469.1	mito 7, cyto 3, chlo 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0348469.1