Miyakogusa Predicted Gene

Lj0g3v0348469.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0348469.1 tr|G7J6N7|G7J6N7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,38.94,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR: pentatricopeptide repeat
domain,Pent,CUFF.23927.1
         (777 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67415 similar to UniRef100_A7NY31 Cluster: Chromosome...  1025   0.0  
gnl|LJGI|BP033188 homologue to UniRef100_A7NYQ7 Cluster: Chromos...   440   e-123

>gnl|LJGI|TC67415 similar to UniRef100_A7NY31 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (48%)
          Length = 723

 Score = 1025 bits (517), Expect = 0.0
 Identities = 531/538 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgagtcgtttcttctcnnnnnnnttgggaatccgtaatttggcttcaatatttaga 60
           ||||||||||||||||||||       |||||||||||||||||||||||||||||||||
Sbjct: 186 atggcgagtcgtttcttctcaaaaaaattgggaatccgtaatttggcttcaatatttaga 245

                                                                       
Query: 61  gttggagagtttgtgagaagtagcaagtccattagtgacacttcaacttcgttgccattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gttggagagtttgtgagaagtagcaagtccattagtgacacttcaacttcgttgccattg 305

                                                                       
Query: 121 agatcttctgttgcagttttcgaccgcaaatatgtgtggggtttcagggaataccatgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agatcttctgttgcagttttcgaccgcaaatatgtgtggggtttcagggaataccatgac 365

                                                                       
Query: 181 ggaaggccaaggggtcccctttggaggggaaagaagctcattggcaaagaggctctcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggaaggccaaggggtcccctttggaggggaaagaagctcattggcaaagaggctctcttt 425

                                                                       
Query: 241 gtgatatccgggttgaagaggttcaaggacgacgacgatgtgcttcacaagttcatcaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtgatatccgggttgaagaggttcaaggacgacgacgatgtgcttcacaagttcatcaaa 485

                                                                       
Query: 301 acccatgttctgcgcctcttgaaggttgacataattgctgttctcacagaacttgagcgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acccatgttctgcgcctcttgaaggttgacataattgctgttctcacagaacttgagcgc 545

                                                                       
Query: 361 caacaagaagtttctctcgctttcaaggtgtttaaggtgatgcaaaagcaggattggtac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 caacaagaagtttctctcgctttcaaggtgtttaaggtgatgcaaaagcaggattggtac 605

                                                                       
Query: 421 aaacctgatgcattcttgtataaggacttaattattgcacttgcaaggtctaaaaagatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aaacctgatgcattcttgtataaggacttaattattgcacttgcaaggtctaaaaagatg 665

                                                                     
Query: 481 gatgaagtgttggaattgtgggaaagcatgagaaaagagaatctgttccctgattctc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gatgaagtgttggaattgtgggaaagcatgagaaaagagaatctgttccctgattctc 723


>gnl|LJGI|BP033188 homologue to UniRef100_A7NYQ7 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 527

 Score =  440 bits (222), Expect = e-123
 Identities = 222/222 (100%)
 Strand = Plus / Minus

                                                                       
Query: 556 ataaggggcttcttgaattatggttctcctgcagatgcaatgaacatatatgaggatatg 615
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ataaggggcttcttgaattatggttctcctgcagatgcaatgaacatatatgaggatatg 468

                                                                       
Query: 616 aagaattctccggatccaccagaggagttgccattcagaatcttgttgaaaggactcttg 675
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagaattctccggatccaccagaggagttgccattcagaatcttgttgaaaggactcttg 408

                                                                       
Query: 676 ccacatcctcttttgagaaacaaggtgaaacaagattttgaggagatcttcccggattcc 735
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccacatcctcttttgagaaacaaggtgaaacaagattttgaggagatcttcccggattcc 348

                                                     
Query: 736 agcatttatgatcctccacaagagatatttggcgtccgataa 777
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agcatttatgatcctccacaagagatatttggcgtccgataa 306