Miyakogusa Predicted Gene
- Lj0g3v0348469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0348469.1 tr|G7J6N7|G7J6N7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,38.94,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR: pentatricopeptide repeat
domain,Pent,CUFF.23927.1
(258 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g064917.1 | PPR containing plant-like protein | HC | chr4:... 368 e-102
Medtr1g031110.1 | PPR containing plant-like protein | HC | chr1:... 180 1e-45
Medtr3g079890.1 | PPR containing plant-like protein | HC | chr3:... 180 1e-45
Medtr3g079970.1 | PPR containing plant-like protein | HC | chr3:... 97 1e-20
Medtr2g099410.1 | PPR containing plant-like protein | HC | chr2:... 74 1e-13
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 59 3e-09
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 59 4e-09
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 5e-09
Medtr1g008360.1 | PPR containing plant-like protein | HC | chr1:... 58 9e-09
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 9e-09
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 57 1e-08
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 55 6e-08
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 6e-08
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 55 6e-08
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 55 9e-08
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 9e-08
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-07
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 53 3e-07
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 52 6e-07
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 6e-07
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 52 7e-07
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 51 9e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 51 9e-07
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 51 1e-06
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 50 2e-06
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 4e-06
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 4e-06
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 49 4e-06
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 49 5e-06
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 5e-06
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 5e-06
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 6e-06
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 6e-06
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 49 7e-06
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 48 7e-06
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 48 7e-06
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 48 8e-06
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 48 9e-06
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 48 9e-06
>Medtr4g064917.1 | PPR containing plant-like protein | HC |
chr4:24262873-24265661 | 20130731
Length = 261
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/215 (82%), Positives = 192/215 (89%)
Query: 44 VAVFDRKYVWGFREYHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHV 103
+ F+ K V GFREYHDGRPRGPLWRGKKLIGKEAL+VISGLKRFKDD++ L KFI THV
Sbjct: 47 ITSFEHKNVTGFREYHDGRPRGPLWRGKKLIGKEALYVISGLKRFKDDEEKLPKFITTHV 106
Query: 104 LRLLKVDIIAVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEV 163
LRLLK+D+IAVLTELERQQEVSLA KVF+VMQKQDWYKPD FLYKDLIIALAR+K+MD+V
Sbjct: 107 LRLLKMDLIAVLTELERQQEVSLALKVFQVMQKQDWYKPDIFLYKDLIIALARAKRMDDV 166
Query: 164 LELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRIXXXX 223
L+LWESMRKENLFPDSQTYTEVIRGFL+ GSPADAMN+YEDMKNSPDPPEELPFRI
Sbjct: 167 LQLWESMRKENLFPDSQTYTEVIRGFLSSGSPADAMNVYEDMKNSPDPPEELPFRILLKG 226
Query: 224 XXXXXXXRNKVKQDFEEIFPDSSIYDPPQEIFGVR 258
RNKVKQDFEEIFPDSSIYDPPQEIFG R
Sbjct: 227 LLPHPLLRNKVKQDFEEIFPDSSIYDPPQEIFGAR 261
>Medtr1g031110.1 | PPR containing plant-like protein | HC |
chr1:10854030-10857450 | 20130731
Length = 232
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 131/195 (67%)
Query: 61 GRPRGPLWRGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDIIAVLTELER 120
+P +WR KK +GKE L + LKR + D L +F++++V RLLK D+++VL E R
Sbjct: 23 SKPSLSIWRRKKELGKEGLIITKELKRLQSDPVRLDRFVRSNVSRLLKSDLVSVLFEFHR 82
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQ 180
Q V L+ K++ +++K+ WY+PD F Y+D+++ LAR+K++DE +W+ ++ E + D
Sbjct: 83 QDNVFLSMKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVDETKRVWDDLKGEGVLFDQH 142
Query: 181 TYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRIXXXXXXXXXXXRNKVKQDFEE 240
T+ +++R +L+ G P++AM+IYE+M+ SP+PP LPFR+ R K+K DF E
Sbjct: 143 TFGDIVRAYLDSGMPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKIKDDFLE 202
Query: 241 IFPDSSIYDPPQEIF 255
+FPD IYDPP+++F
Sbjct: 203 VFPDMIIYDPPEDLF 217
>Medtr3g079890.1 | PPR containing plant-like protein | HC |
chr3:36099666-36104581 | 20130731
Length = 236
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 131/195 (67%)
Query: 61 GRPRGPLWRGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDIIAVLTELER 120
+P +WR KK +GKE L + LKR + D L +F++++V RLLK D+++VL E R
Sbjct: 27 SKPSLSIWRRKKELGKEGLVITKELKRLQTDPVRLDRFVRSNVSRLLKSDLVSVLFEFHR 86
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQ 180
Q V L+ K++ +++K+ WY+PD F Y+D+++ LAR+K++DE +W+ ++ E + D
Sbjct: 87 QDNVFLSMKLYDIVRKEIWYRPDMFFYRDMLVMLARNKRVDETKRVWDDLKGEGVLFDQH 146
Query: 181 TYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRIXXXXXXXXXXXRNKVKQDFEE 240
T+ +++R +L+ G P++AM+IYE+M+ SP+PP LPFR+ R K+K DF E
Sbjct: 147 TFGDIVRAYLDSGMPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKIKDDFLE 206
Query: 241 IFPDSSIYDPPQEIF 255
+FPD IYDPP+++F
Sbjct: 207 VFPDMIIYDPPEDLF 221
>Medtr3g079970.1 | PPR containing plant-like protein | HC |
chr3:36139209-36142180 | 20130731
Length = 144
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 76/113 (67%)
Query: 61 GRPRGPLWRGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDIIAVLTELER 120
+P +WR KK +GKE L + LKR + D L +F++++V RLLK D+++VL E
Sbjct: 27 SKPSLSIWRRKKELGKEGLIITKELKRLQTDPVRLDRFVRSNVSRLLKSDLVSVLFEFHG 86
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKE 173
Q V L+ K++ +++K+ WY+PD F Y+D+++ LAR+K++DE +W+ ++ E
Sbjct: 87 QDNVFLSMKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVDETKRVWDDLKGE 139
>Medtr2g099410.1 | PPR containing plant-like protein | HC |
chr2:42622332-42619896 | 20130731
Length = 246
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 52 VWGFREYHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDI 111
V G R + +P +I KE++ VI LK K+ ++ L++ +K+ +LRLLK D+
Sbjct: 33 VCGLRSCKNKKPPS------MVISKESVQVIHALKLAKNSEEKLNQVLKSKLLRLLKPDV 86
Query: 112 IAVLTELERQQEVSLAFKVFKVMQKQDWYKPDAF---LYKDLIIALARSKKMDEVLELWE 168
+ VL EL RQ ++ L+ KV + + + D LY D I+ L ++K +++ E++
Sbjct: 87 LIVLAELHRQNQLHLSLKVLEFIISDEEAGYDKLLLPLYSDTILLLGKNKMIEKAEEMFY 146
Query: 169 SMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+ ++ L PD++ + E+I +L G+ AM +Y MK S P+ L F I
Sbjct: 147 EVVEKGLKPDTRLFNEMIGVYLQVGNTEKAMEVYRSMKASGCLPDALTFTI 197
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLK--VDIIAVLTELERQQEVSLAFKVFKVMQKQ 137
+I+G + K D ++ F + H +++ V +++ L + ++S A K+ M +
Sbjct: 201 ILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDR 260
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
PD Y L+ AL ++ +D+ + L ++ + L P+ TYT +I G G P D
Sbjct: 261 GQ-PPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 319
Query: 198 AMNIYEDM 205
A NI+ED+
Sbjct: 320 AQNIFEDL 327
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESM-RKENLFPD 178
R+ ++ AF+V K M+ + P+ Y L+ L R+ ++ E EL+E M K+ + PD
Sbjct: 249 RRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPD 308
Query: 179 SQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
TY +I GF G A N+ E MKN+ P
Sbjct: 309 PLTYNVLINGFCREGKADRARNVIEFMKNNGCCPN 343
>Medtr7g056613.1 | PPR containing plant-like protein | HC |
chr7:20228007-20222513 | 20130731
Length = 508
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A KVF+++++Q WY+P +Y LI+ L + K+ ++ EL+++M E D ++YT ++
Sbjct: 133 ALKVFELLREQLWYRPYPGVYIKLIVMLGKCKQPEKAFELFQAMVDEGCVLDCESYTALL 192
Query: 187 RGFLNYGSPADAMNIYEDMKNSP 209
+ G A+++ E+MK++P
Sbjct: 193 SAYGRSGLLDKALSLLEEMKSTP 215
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLK--VDIIAVLTELERQQEVSLAFKVFKVMQKQ 137
+I+G + K D ++ F + H +++ V +++ L + ++S A K+ M +
Sbjct: 66 ILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDR 125
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
PD Y L+ AL ++ D+ + L ++ + L P+ TYT +I G G P D
Sbjct: 126 GQ-PPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 184
Query: 198 AMNIYEDM 205
A NI+ED+
Sbjct: 185 AQNIFEDL 192
>Medtr1g008360.1 | PPR containing plant-like protein | HC |
chr1:869072-866590 | 20130731
Length = 428
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
++++ ++ A+ +F++M+ + YKPD Y + I A ++S +D +L + + +
Sbjct: 142 SLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKA 201
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPP 212
L PD QT+ VI G +N + A ++E+MK S P
Sbjct: 202 TGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIP 241
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+G + K D+ ++ F + H +L+ D++ +++ L + ++S A K+ M
Sbjct: 187 IMINGFCKIKMTDEAMNLFEEMHCRKLIP-DVVTYNSLINGLCKSGKISYALKLVDEMHD 245
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ PD Y L+ AL ++ ++D+ + L +++ + + P+ TYT +I G G
Sbjct: 246 RGQ-PPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLE 304
Query: 197 DAMNIYEDM 205
DA NI+ED+
Sbjct: 305 DAHNIFEDL 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 108 KVDIIAVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELW 167
KV ++ L + E A ++ + + + +PD +Y +I + + K +++ +L+
Sbjct: 7 KVGYGTLINGLCKVGETKAALELLRRVDGK-LVQPDVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 168 ESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
M + +FPD TY +I GF G DA +++ M + P F I
Sbjct: 66 SEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNI 117
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 114 VLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKE 173
++ L R+ +V+ A +F+ M + + PD+F Y L+ +L R KK+ E +L M+ +
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKGFV-PDSFTYTTLLNSLCRKKKLREAYKLLCRMKVK 281
Query: 174 NLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
PD Y VI GF G DA + +DM+ + P + +R
Sbjct: 282 GCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYR 326
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+GL + K D+ ++ F + H +++ D++ +++ L + ++S A K+ M
Sbjct: 187 ILINGLCKIKMTDEAMNLFEEMHCRKIIP-DVVTYNSLIDGLCKSGKISYALKLVDEMHD 245
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ PD Y ++ AL ++ ++D+ + L +++ + + P+ TYT +I G G
Sbjct: 246 R-GVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLE 304
Query: 197 DAMNIYEDM 205
DA NI+ED+
Sbjct: 305 DAHNIFEDL 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
++V+ A +F M Q PD Y LI L + K DE + L+E M + PD T
Sbjct: 161 KKVNKAKSIFNTMA-QGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
Y +I G G + A+ + ++M + PP+ + +
Sbjct: 220 YNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITY 255
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+E A VF +M Q D Y +I L++ K +DE ++L+E MR EN+ PD
Sbjct: 269 KEAGKAKNVFNIMA-QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 327
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
Y+ +I G G A+ ++M + PP + +
Sbjct: 328 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITY 363
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A +F M Q PD Y LI +SK DE + L+E M L PD T
Sbjct: 206 KEVNKAKSIFNTMA-QGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVT 264
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR------IXXXXXXXXXXXRNKVK 235
Y +I G G + A+ + ++M + PP + + K+K
Sbjct: 265 YNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQVDKAITLLTKIK 324
Query: 236 QDFEEIF 242
+F +IF
Sbjct: 325 DEFSQIF 331
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 56.2 bits (134), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
E+ A+KVF++M ++ + + Y +LI K+DE LEL+ M+++ FPD T
Sbjct: 239 HELGDAYKVFEIMPQEGCLR-NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPT 297
Query: 182 YTEVIRGFLNYGSPADAMNIYEDM-KNSPDP 211
YT ++ F G +A+ +E+M +N +P
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEP 328
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
++T L R ++ A V KVM K+ PD + Y LI AL R K+D +E + M
Sbjct: 326 TLITALCRDGKIDEAKNVLKVM-KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
PD +Y ++ G+ +A+NI+E + PP
Sbjct: 385 GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQ 180
+QE F VF M ++ PD Y +I L ++K +DE + L++ M +++ P++
Sbjct: 323 KQENKATF-VFNTMARR-GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTV 380
Query: 181 TYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
TY +I G L YG +DA ++ +M N P + + +
Sbjct: 381 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 129 KVFKVMQ--KQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
KV K++ K KPD ++Y ++I+ L ++ ++ E +L MRK +FPD+ YT VI
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVI 354
Query: 187 RGFLNYGSPADAMNIYEDMKNSPDPPE 213
GF G+ + A ++++M+ P+
Sbjct: 355 SGFCKLGNVSAACKLFDEMRRKKIVPD 381
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+GL + K D+ ++ F + H +++ D++ +++ L + ++S A K+ M
Sbjct: 187 ILINGLCKIKMTDEAMNLFEEMHCRKIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHD 245
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ PD Y ++ AL ++ ++D+ + L ++ + + P+ TYT +I G G
Sbjct: 246 R-GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLD 304
Query: 197 DAMNIYEDM 205
DA NI+ED+
Sbjct: 305 DAHNIFEDL 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
++V+ A +F M Q PD Y LI L + K DE + L+E M + PD T
Sbjct: 161 KKVNKAKSIFNTMA-QGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
Y +I G G + A+ + ++M + PP+ + +
Sbjct: 220 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITY 255
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
AV+ L + + A +VFK M K PD + Y LI R ++D+ E+++ MR
Sbjct: 256 AVIYGLCQGGILDEASEVFKEM-KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 314
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+ P+ +Y+ +I GF G A+ ++E+MKNS P+ + I
Sbjct: 315 SGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 361
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDS 179
R+ V A +VFK M+ P+ + Y LI + ++D+ LE++E M+ + PD
Sbjct: 298 RKGRVDQASEVFKEMRNSGIL-PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDV 356
Query: 180 QTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
+Y+ +I GF G A+ +E+M ++ P +
Sbjct: 357 YSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNY 394
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDS 179
+ + V+ A K F+ MQKQ KP+ Y LI L + K++E ++LW+ M L P+
Sbjct: 285 KDENVAAAKKAFEEMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 180 QTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
TY +I GF +A +++D+ P + F
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDS 179
+ + V+ A K F+ MQKQ KP+ Y LI L + K++E ++LW+ M L P+
Sbjct: 151 KDENVAAAKKAFEEMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 209
Query: 180 QTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
TY +I GF +A +++D+ P + F
Sbjct: 210 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 248
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A VF M ++ + Y +I L ++K +DE + L++ M +N+ PD T
Sbjct: 183 KEVNKATFVFNTMVRR-GVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVT 241
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
Y +I G L YG +DA ++ +M N P + + +
Sbjct: 242 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYN 278
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A +F M+K PD + Y LI + R+ MDE L+ +M + PD ++ ++
Sbjct: 496 AMGLFNEMKKLGCI-PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIIL 554
Query: 187 RGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
G G P AM ++ MK+S P+ + +
Sbjct: 555 NGLARTGGPKRAMEMFAKMKSSTIKPDAVSY 585
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+G + K D+ ++ F + H ++ D++ +++ L + ++S A K+ M
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIP-DVVTYNSLIDGLCKSGKISYALKLVDEMHD 399
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ D Y ++ AL ++ ++D+ + L M+ E + PD TYT +I G G
Sbjct: 400 R-GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Query: 197 DAMNIYEDM 205
DA NI+ED+
Sbjct: 459 DAQNIFEDL 467
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
++V+ A +F M Q PD Y +I + KK+DE + L++ M +N+ P+ T
Sbjct: 161 KQVNKANSIFNTMA-QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 219
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
YT +I G G + A+ + ++M + PP+ + +
Sbjct: 220 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITY 255
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
++V+ A +F M Q PD Y +I + KK+DE + L++ M +N+ P+ T
Sbjct: 297 KQVNKANSIFNTMA-QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
YT +I G G + A+ + ++M + PP+ + +
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITY 391
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQ 180
+ V++A +F M K +PD Y LI +++ +DE + L++ MR +NL PD
Sbjct: 453 RNNVNVAKDIFNRMVKSGL-EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511
Query: 181 TYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+Y +I G N G + ++M +S P+ + + I
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
A++ ++ V A ++F M K+ +PD Y LI ++K +DE + L++ +
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGL-EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+NL P +Y +I G N G + + ++M S PP+ + + I
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 121 QQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQ 180
+ V++A +F M K +PD Y LI +++ +DE + L++ MR +NL PD
Sbjct: 453 RNNVNVAKDIFNRMVKSGL-EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511
Query: 181 TYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+Y +I G N G + ++M +S P+ + + I
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
A++ ++ V A ++F M K+ +PD Y LI ++K +DE + L++ +
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGL-EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+NL P +Y +I G N G + + ++M S PP+ + + I
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDS 179
+ + V+ A K F+ MQKQ KP+ Y LI L + K++E ++LW+ M L P+
Sbjct: 285 KDENVAAAKKAFEEMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 180 QTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
TY +I GF +A + +D+ P + F
Sbjct: 344 VTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFN 382
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 136 KQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSP 195
K +PD Y LI R KK+DE L+ M+ +NL P+ +YT +++GF++ G
Sbjct: 266 KSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGFVDVGKV 325
Query: 196 ADAMNIYEDMKNSPDPPEELPF 217
A ++E+MK+ P + F
Sbjct: 326 DRAFEVFEEMKDCGIKPNAVTF 347
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
EV+ A +F M Q PD Y +I + K +DE ++L+E M + +FPD T
Sbjct: 328 NEVNKAESIFNTMA-QIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVT 386
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
Y +I G G + A+ + +M + PP + +
Sbjct: 387 YNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYN 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 81 VISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQKQ 137
+ISG + K D+ + F + H ++ D++ +++ L + +S A K+ M +
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFP-DVVTYNSLIDGLCKSGRISYALKLIGEMHDR 413
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
P+ Y L+ AL ++ +D+ +EL ++ N+ P TY +I G G D
Sbjct: 414 GQ-PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472
Query: 198 AMNIYEDM 205
A ++ED+
Sbjct: 473 AQKVFEDV 480
>Medtr4g104830.1 | PPR containing plant protein | LC |
chr4:43434609-43436827 | 20130731
Length = 638
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A K+ + M K D Y+PD+ Y LI L ++ + +E L++ + M+ N++ D +T+T +I
Sbjct: 391 AEKIVETM-KNDGYEPDSITYSQLIFGLCKTGRFEEALKVIDDMKANNIWVDIKTWTILI 449
Query: 187 RGFLNYGSPADAMNIYEDMKNSPDPPEEL 215
+G+ + G DA+ M + D EL
Sbjct: 450 QGYCDAGKLDDALFSLYKMIETKDADAEL 478
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A +F M Q+ P Y LI + KK+DE + L+E M L PD T
Sbjct: 183 KEVNKAKSIFNTMA-QEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVT 241
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
Y +I G G + A+ + ++M + PP+
Sbjct: 242 YNSLIDGLCKSGKISYALKLVDEMHDRGQPPD 273
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 120 RQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDS 179
+Q ++ A K+F M KQ YKP+ Y LI + M +++ +M+ NL P+
Sbjct: 567 KQHDLDSALKMFGQMMKQK-YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNV 625
Query: 180 QTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
TYT +I GF G P A + +E M + P + F
Sbjct: 626 VTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTF 663
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 52.0 bits (123), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%)
Query: 110 DIIAVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWES 169
D V E ++ + + ++FK MQ+Q W KP+ +Y +I L R +D+ E+++
Sbjct: 104 DFAVVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIITLLGREGLLDKCREVFDE 163
Query: 170 MRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
M + + YT VI + G ++ + E MK P L +
Sbjct: 164 MPSQGVARSVFAYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTY 211
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A +F M Q PD Y +I + KK DE + L++ M ++N+ PD T
Sbjct: 344 KEVNKAKSIFNTMA-QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
Y+ +I G G + A+ + + M + PP +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYN 439
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
V++ R E+ AF++ K+ + PDA Y LI L +K+ E +L++ M
Sbjct: 444 TVISLFCRNGELGKAFQM-KLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLG 502
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRIXXXXXXXXXXXRN 232
L PD TYT ++ G+ G + A++++++M P+ + + + R
Sbjct: 503 RGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTR- 561
Query: 233 KVKQDFEEIFPDSSI 247
+ K+ ++F D S+
Sbjct: 562 EAKKLLLKLFYDESV 576
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 114 VLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKE 173
++ L + E A + ++++ KPD +Y +I +L + K + + EL+ M ++
Sbjct: 173 LINGLCKSGETKAALSLLRMIEGLS-VKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEK 231
Query: 174 NLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
+FP+ TY+ +I GF G DA+ ++ +M P+ F I
Sbjct: 232 KIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNI 277
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A +F M Q PD Y +I + KK DE + L++ M ++N+ PD T
Sbjct: 344 KEVNKAKSIFNTMA-QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPP 212
Y+ +I G G + A+ + + M + PP
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 111 IIAVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESM 170
+I+ L ++ R L K KV PDA +YK +I L + K++ LEL+ M
Sbjct: 166 LISGLCKINRHDAAMLVLKKMKV-----CVPPDAIIYKTIIDCLCKDSKVETALELYTEM 220
Query: 171 RKENLFPDSQTYTEVIRGFL 190
+ +FPD TYT +I G
Sbjct: 221 IESGIFPDVFTYTTLIHGLC 240
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 109 VDIIAVLTELERQQEV-SLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELW 167
++A LT L+R + SL KV +++ KPD+ L+ +I A + S K+ E ++++
Sbjct: 82 TTLVAALTRLKRFNSIPSLLSKV-----EENGVKPDSILFNAMINAFSDSGKVHEAMKIF 136
Query: 168 ESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDM-KNSPDPPEELPFRI 219
M++ P + T+ +I+GF G P +AM + E M ++ P E + I
Sbjct: 137 RKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNI 189
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 109 VDIIAVLTELERQQEV-SLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELW 167
++A LT L+R + SL KV +++ KPD+ L+ +I A + S K+ E ++++
Sbjct: 82 TTLVAALTRLKRFNSIPSLLSKV-----EENGVKPDSILFNAMINAFSDSGKVHEAMKIF 136
Query: 168 ESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDM-KNSPDPPEELPFRI 219
M++ P + T+ +I+GF G P +AM + E M ++ P E + I
Sbjct: 137 RKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNI 189
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 81 VISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQKQ 137
+I G + K D+ ++ F + H ++ D++ +++ L + ++S A K+ M +
Sbjct: 370 LIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHDR 428
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
PD Y ++ AL ++ ++D+ + L ++ + + P+ TYT +I G G D
Sbjct: 429 -GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 487
Query: 198 AMNIYEDM 205
A NI+ED+
Sbjct: 488 AHNIFEDL 495
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
+EV+ A + M Q PD Y LI + KK+DE + L++ M +++ PD T
Sbjct: 343 KEVNKAKSILYTMS-QRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 401
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPF 217
Y +I G G + A+ + ++M + PP+ + +
Sbjct: 402 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITY 437
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 114 VLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKE 173
++ +L +Q + A + F M + + D LY LI R KKMD V +L + MR+
Sbjct: 261 LIQDLCKQMMMREAVEYFNEMVDRGC-RSDVALYTCLITGFGRQKKMDVVYDLLKEMRER 319
Query: 174 NLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPP 212
PD +TY +I+ + P DA+ +Y+ M S P
Sbjct: 320 GCPPDGRTYNALIKLMTSQHMPDDAVRVYKKMIQSGVEP 358
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
EV+ A VF ++ Q PDA Y +I + K +DE L L++ MR+ + P++ T
Sbjct: 253 NEVNKAKHVFNIIS-QMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVT 311
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
Y +I G G A + + M N+ P +
Sbjct: 312 YNSLIDGLCKSGRIPYAWELVDTMHNNGQPAD 343
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 86 KRFKDDDDVLHKFIKTHVLRLLKVDIIAVLTELERQ---QEVSLAFKVFKVMQKQDWYKP 142
+R K+ +VL +K + K D+ + ++R +EV+ A +F + Q P
Sbjct: 296 RRLKEAKNVLAMMMKQGI----KPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS-QRGVNP 350
Query: 143 DAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIY 202
+ Y +I + KK+DE + L++ M N+ PD TY +I G G + A+ +
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410
Query: 203 EDMKNSPDPPEELPFR 218
++M + P +++ +
Sbjct: 411 DEMHDRGVPHDKITYN 426
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I G + K D+ ++ F + H ++ D++ +++ L + ++S A K+ M
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHD 415
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ D Y ++ AL ++ ++D+ + L M+ E + PD TYT ++ G G
Sbjct: 416 R-GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLE 474
Query: 197 DAMNIYEDM 205
DA ++ED+
Sbjct: 475 DARIVFEDL 483
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 105 RLLKVDIIAVLTELERQQEVSLAFKVFKVMQ--KQDWYKPDAFLYKDLIIALARSKKMDE 162
R LK D IA T + + ++ K F + + K + + PD Y LI L + D+
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDD 505
Query: 163 VLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
EL + MR E + PD TYT +I L G A ++ DM P + + +
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 122 QEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQT 181
EV+ A +F M Q PD Y +I L + K +DE + L+E M N+ D T
Sbjct: 317 NEVNKAKDIFNSMM-QRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVIT 375
Query: 182 YTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFR 218
Y+ +I G G A ++++M + PP+ + +
Sbjct: 376 YSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYN 412
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 81 VISGLKRFKDDDDVLHKFIK--THVLRLLKVDIIAVLTELERQQEVSLAFKVFKVMQKQD 138
+I GL D + LH K +L KV ++ L + + A ++ + +++Q
Sbjct: 133 LIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQL 192
Query: 139 WYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADA 198
++PD +Y +I L + K +++ +L+ M ++ + PD TYT +I GF G +
Sbjct: 193 LFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEV 252
Query: 199 MNIYEDM--KN-SPD 210
+ +M KN +PD
Sbjct: 253 FVLLNEMVLKNINPD 267
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 136 KQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSP 195
K + + PDA Y L+ A ++ ++V ++ E M K D TY +I + +G
Sbjct: 398 KSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRH 457
Query: 196 ADAMNIYEDMKNSPDPPEELPFRI 219
+A+ +Y DMK+S P+ + + +
Sbjct: 458 DEALRLYRDMKSSGRNPDAVTYTV 481
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+G + K D+ + F + H ++ D+I A++ L + +S A ++ M
Sbjct: 187 IMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSALIDGLCKSGRISYALELVDEMHD 245
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ +PD Y ++ AL + +D+ + L ++ + + PD TYT +++G G
Sbjct: 246 RGQ-QPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLE 304
Query: 197 DAMNIYEDM 205
DA ++ED+
Sbjct: 305 DARKVFEDL 313
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQK 136
+I+G + K D+ + F + H ++ D+I A++ L + +S A ++ M
Sbjct: 299 IMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSALIDGLCKSGRISYALELVDEMHD 357
Query: 137 QDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPA 196
+ +PD Y ++ AL + +D+ + L ++ + + PD TYT +++G G
Sbjct: 358 RGQ-QPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLE 416
Query: 197 DAMNIYEDM 205
DA ++ED+
Sbjct: 417 DARKVFEDL 425
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 49.3 bits (116), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 99 IKTHVLRL-LKVDIIAVLTELE---RQQEVSLAFKVFKVMQKQDW-YKPDAFLYKDLIIA 153
I+ +LR+ LKV+++ T ++ + +V A +VF M DW KPD + Y L+
Sbjct: 354 IRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMV--DWNLKPDCYSYNTLLDG 411
Query: 154 LARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
R K+ + L E M + + P TY VI+G ++ GS DA++++ M P
Sbjct: 412 YCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPN 471
Query: 214 EL 215
E+
Sbjct: 472 EI 473
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 69 RGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVS 125
RG K +I+G + K D+ + F + H ++ D+I A++ L + +S
Sbjct: 331 RGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSALIDGLCKSGRIS 389
Query: 126 LAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEV 185
A ++ M + P+ Y ++ AL ++ ++D+ + L + + + P TYT +
Sbjct: 390 YALQLVDQMHDR-GVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTIL 448
Query: 186 IRGFLNYGSPADAMNIYEDM 205
I G G DA NI+ED+
Sbjct: 449 IDGLCKGGRLKDARNIFEDL 468
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 80 FVISGLKRFKDDDDVLHKFIKTHVLRLLK--VDIIAVLTELERQQEVSLAFKVFKVMQKQ 137
+I+G + K D+ + + H +++ V +++ L + ++S A K+ M +
Sbjct: 252 ILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDR 311
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
P+ Y ++ AL ++ ++D + L M+ + + P+ TYT +I+G G D
Sbjct: 312 GQ-PPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLED 370
Query: 198 AMNIYEDM 205
A ++ED+
Sbjct: 371 ARKVFEDL 378
>Medtr4g104800.1 | PPR containing plant protein | LC |
chr4:43426065-43428441 | 20130731
Length = 637
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A K+ + M K Y+PD Y LI ++++ E L++ + M+ NL+ D +T+T +I
Sbjct: 394 AEKIVETM-KNAGYEPDNITYSQLIFGFCKTRRFKEALKVIDHMQAINLWVDIKTWTILI 452
Query: 187 RGFLNYGSPADA-MNIYEDMKNSPDPPEEL 215
+G+ + G A + +Y+ M+ S P EL
Sbjct: 453 QGYCDAGELDGALLGLYKMMEKSSSPDAEL 482
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
+L E QQ+ L K D ++PD Y +I A ++KK DE + ++ M
Sbjct: 231 TILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLS 290
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPE 213
+N+ P Y I G N +A +E K S PPE
Sbjct: 291 KNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPE 331
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 69 RGKKLIGKEALFVISGLKRFKDDDDVLHKFIKTHVLRLLKVDII--AVLTELERQQEVSL 126
RG + VI+G + K D + F + H ++ I +++ L + +S
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A ++ +M + +PD Y ++ AL ++ +D+ + L ++ + + P+ TYT +I
Sbjct: 404 ALELIDLMHDRGQ-QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462
Query: 187 RGFLNYGSPADAMNIYEDM 205
G G DA NI+ED+
Sbjct: 463 DGLCKGGRLEDARNIFEDL 481
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 81 VISGLKRFKDDDDVLHKFIKTHVLRLLKVDII---AVLTELERQQEVSLAFKVFKVMQKQ 137
+I+G + K D+ + F + H ++ D+I +++ L + +S A ++ M +
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYSSLIDGLCKSGRISYALELVDEMHYR 537
Query: 138 DWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPAD 197
+PD Y ++ AL + +D+ + L ++ + + PD TYT +++G G D
Sbjct: 538 GQ-QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLED 596
Query: 198 AMNIYEDM 205
A ++ED+
Sbjct: 597 ARKVFEDL 604
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 99 IKTHVLRLLKVDIIAVLTELERQQEVSLAFK---VFKVMQKQDWYKPDAFLYKDLIIALA 155
+ T + + LK D++A + + V+ FK +FK M +++ D Y +I
Sbjct: 84 LNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAEREL-SYDVRSYNIMINEFC 142
Query: 156 RSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEEL 215
+ K +DE ++L+E M + +FPD TY +I G G + AM + ++M + +PP +
Sbjct: 143 KMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 202
Query: 216 PF 217
+
Sbjct: 203 TY 204
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 81 VISGLKRFKDDDDVLHKFIKTHVLRLLK--VDIIAVLTELERQQEVSLAFKVFKVMQKQD 138
+I+GL + K D+ ++ F + +++ V +++ L + ++S K+ M +
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG 415
Query: 139 WYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADA 198
P+ Y ++ AL ++ +D+ + L +++ + + PD TYT +I+G G DA
Sbjct: 416 Q-PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474
Query: 199 MNIYEDM 205
++ED+
Sbjct: 475 QKVFEDL 481
>Medtr3g033040.1 | PPR containing plant-like protein | HC |
chr3:10491879-10488167 | 20130731
Length = 534
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A +F++++ Q WY+P Y L++ L++ K+ E +L+E+M E L P T ++
Sbjct: 115 ALMIFELLRNQYWYEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALV 174
Query: 187 RGFLNYGSPADAMNIYEDMKNSPD 210
+ G A + EDMK+ D
Sbjct: 175 SAYGQSGLFRHAFSTIEDMKSVVD 198
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 113 AVLTELERQQEVSLAFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRK 172
A++ +Q++ ++ +M P + Y+++I L + +K DE ++ ++
Sbjct: 241 ALINGFCKQKQYDRVSEILHIMIAMKC-NPSIYTYQEIINGLLKRRKNDEAFRVFNDLKD 299
Query: 173 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRI 219
FPD YT VI+GF + G A+A ++ +M P E + +
Sbjct: 300 RGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNV 346
>Medtr3g033040.2 | PPR containing plant-like protein | HC |
chr3:10491901-10488249 | 20130731
Length = 489
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 127 AFKVFKVMQKQDWYKPDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVI 186
A +F++++ Q WY+P Y L++ L++ K+ E +L+E+M E L P T ++
Sbjct: 115 ALMIFELLRNQYWYEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALV 174
Query: 187 RGFLNYGSPADAMNIYEDMKNSPD 210
+ G A + EDMK+ D
Sbjct: 175 SAYGQSGLFRHAFSTIEDMKSVVD 198
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 99 IKTHVLRLLKVDIIAVLTELERQQEVSLAFK---VFKVMQKQDWYKPDAFLYKDLIIALA 155
+ T + + LK D++A + + V+ FK +FK M +++ D Y +I
Sbjct: 89 LNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAEREL-SYDVRSYNIMINEFC 147
Query: 156 RSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEEL 215
+ K +DE ++L+E M + +FPD TY +I G G + AM + ++M + +PP +
Sbjct: 148 KMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 207
Query: 216 PF 217
+
Sbjct: 208 TY 209
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 142 PDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNI 201
P+ Y ++ AL ++ +D+ + L +++ + + PD TYT +I+G G DA N+
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 202 YEDM 205
+ED+
Sbjct: 469 FEDL 472
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 142 PDAFLYKDLIIALARSKKMDEVLELWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNI 201
P+ Y ++ AL ++ +D+ + L +++ + + PD TYT +I+G G DA N+
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 202 YEDM 205
+ED+
Sbjct: 469 FEDL 472