Miyakogusa Predicted Gene

Lj0g3v0343589.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVX9_SOYBN 253 59.9 63.4 (tr|I1LVX9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78260.1 165 83.1 92.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:29447317-29450181 FORWARD LENGTH=287
Medicago Medtr5g064120.1 198 95.7 98.9 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:26612934-26618708 | 20130731
Soybean Glyma13g01740.1 253 59.9 63.4  
LJGI gnl|LJGI|TC71875 801 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0343589.1 length: 269 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 7.4e-18 18-75
HMMSmart SM00360 RNA 5.5e-24 17-89
ProfileScan PS50102 RRM 16.654 16-93
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 4.4e-24 12-107
no_ID  
HMMPanther PTHR24011 FAMILY 3.2e-76 6-248
HMMPanther PTHR24011:SF87 SUBFAMILY 3.2e-76 6-248
Seg seg seg NA 94-105
109-155
163-176
231-260
superfamily SSF54928 RNA-binding 4.8e-25 4-112
Wolf-PSORT
Lj0g3v0343589.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0343589.1