Miyakogusa Predicted Gene

Lj0g3v0343589.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0343589.1 Non Chatacterized Hit- tr|I1MAU7|I1MAU7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25850 PE,80.65,0,RRM,RNA
recognition motif domain; RNA recognition motif,RNA recognition motif
domain; seg,NULL; RNA-,CUFF.23571.1
         (810 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71875                                                      801   0.0  

>gnl|LJGI|TC71875 
          Length = 714

 Score =  801 bits (404), Expect = 0.0
 Identities = 404/404 (100%)
 Strand = Plus / Plus

                                                                       
Query: 407 caccagtactgtacccgccatatggctaccccacctacactcctgatcattatgggtacc 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caccagtactgtacccgccatatggctaccccacctacactcctgatcattatgggtacc 60

                                                                       
Query: 467 accaagctgcaatgtataaccctcagattcatcatcagcaaccacaatactatcatcaac 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  accaagctgcaatgtataaccctcagattcatcatcagcaaccacaatactatcatcaac 120

                                                                       
Query: 527 aaatgtatggagcagcatcatcttccaccccatattactatggctattctgtgcaagcag 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgtatggagcagcatcatcttccaccccatattactatggctattctgtgcaagcag 180

                                                                       
Query: 587 caccaaggggtacgttttctacaccccaggcacatcgcatgccagctggaccctcctatt 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccaaggggtacgttttctacaccccaggcacatcgcatgccagctggaccctcctatt 240

                                                                       
Query: 647 tatactaccctactacaccaattgaaggttccttctctgcttatcgcccaattcaacaac 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatactaccctactacaccaattgaaggttccttctctgcttatcgcccaattcaacaac 300

                                                                       
Query: 707 aaccagtaataaggcaaccctctccttcccctagtgattctcagactcagcagcgtacat 766
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccagtaataaggcaaccctctccttcccctagtgattctcagactcagcagcgtacat 360

                                                       
Query: 767 catccgagacatcagctggagtagttataacttcagaaagttga 810
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catccgagacatcagctggagtagttataacttcagaaagttga 404