Miyakogusa Predicted Gene

Lj0g3v0170419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SYE1_LOTJA 195 100.0 100.0 (tr|I3SYE1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT1G65700.2 167 84.7 90.8 | Symbols: | Small nuclear ribonucleoprotein family protein | chr1:24434463-24435870 REVERSE LENGTH=98
Medicago Medtr4g084910.1 177 89.9 97.0 | u6 snRNA-associated-like-Smprotein | HC | chr4:33145686-33149143 | 20130731
Soybean Glyma15g40590.2 180 90.8 95.9  
LJGI gnl|LJGI|TC58270 589 100.0 100.0 similar to UniRef100_A7PAX0 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0170419.1 length: 98 aa.
IPR001163 Ribonucleoprotein LSM domain
method AccNumber shortName E-value location
HMMPfam PF01423 LSM 1.7e-16 7-73
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
HMMSmart SM00651 snRNP 3.6e-18 5-74
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 7.6e-18 7-83
no_ID  
Gene3D G3DSA:2.30.30.100 no description 7.9e-21 7-78
HMMPanther PTHR15588 LSM1 7.8e-46 5-98
Wolf-PSORT
Lj0g3v0170419.1	cyto 4, extr 3, cyto_nucl 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0170419.1