Miyakogusa Predicted Gene

Lj0g3v0092039.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TJ73_SOYBN 660 73.8 82.5 (tr|C6TJ73) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G52180.1 408 49.8 66.0 | Symbols: | LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB, predicted (InterPro:IPR019395); Has 82 Blast hits to 82 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:21200165-21201541 REVERSE LENGTH=458
Medicago Medtr1g100767.1 677 73.0 81.7 | transmembrane protein 161AB, putative | HC | chr1:45696559-45698304 | 20130731
Soybean Glyma20g29620.1 660 73.8 82.5  
LJGI gnl|LJGI|AV423517 896 99.4 99.4 weakly similar to UniRef100_A7QVH3 Cluster: Chromosome chr16 scaffold_189, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_189, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0092039.1 length: 456 aa.
IPR019395 Transmembrane protein 161A/B
method AccNumber shortName E-value location
HMMPfam PF10268 Tmemb_161AB 3.6e-09 218-398
no_ID  
Seg seg seg NA 151-158
Putative transmembrane regions
  From To
TM segments
SOSUI		 16 38
113 135
140 162
185 207
217 239
261 283
327 349
379 401
424 446
Wolf-PSORT
Lj0g3v0092039.1	plas 9, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0092039.1