Miyakogusa Predicted Gene

Lj0g3v0092039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092039.1 tr|F2EGT7|F2EGT7_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,33.48,6e-16,Tmemb_161AB,Transmembrane protein 161A/B;
seg,NULL,CUFF.5026.1
         (456 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100767.1 | transmembrane protein 161AB, putative | HC | c...   677   0.0  

>Medtr1g100767.1 | transmembrane protein 161AB, putative | HC |
           chr1:45696559-45698304 | 20130731
          Length = 453

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/460 (73%), Positives = 376/460 (81%), Gaps = 11/460 (2%)

Query: 1   MLHFLLSYKNPLLQASLSLTLAFILAFFRIPIFFLHGLQTYIHPDSQPQSNGLRAAIRRP 60
           ML F+L YKNPLL ASLS+ LA  L+FFRIPI FL+ LQTYIHPDSQPQSNGL+AAIRRP
Sbjct: 1   MLEFVLFYKNPLLHASLSIILALTLSFFRIPILFLYALQTYIHPDSQPQSNGLKAAIRRP 60

Query: 61  GIDNYQPLSSKTSAELRKRSKAKDKVDFDENNAQIFRLRLDEGHLQSRLYVDQYCAAFTV 120
           G D        T+ ELRKR+K+K+K DFDENNAQIFR+RLD+ HLQSRLY+DQYC AFTV
Sbjct: 61  GTDG-------TTTELRKRNKSKEKPDFDENNAQIFRIRLDQSHLQSRLYIDQYCVAFTV 113

Query: 121 SFVALFSILVHSFLDSKEDHGLLKTGVIVPXXXXXXXXYSWGSTLAKTAFERSASRRSEK 180
           SFV LF+IL+  FLD  +++GLL  GV VP        Y+WG    K  FERSASRRSEK
Sbjct: 114 SFVTLFAILLQKFLDCDDNNGLLANGVFVPILLSILSLYTWGMLFVKVTFERSASRRSEK 173

Query: 181 QLSIVFGVLGVFLGLMFVPEGASLVLDFHFGVPVDGPMRVFIAALMGCLAGFLFIPAGRS 240
           QLS+VFGVLGVFLGL FVPE ASLVLDF FGV VDG  RV I+ +MGCLA F+FIPA RS
Sbjct: 174 QLSVVFGVLGVFLGLFFVPEVASLVLDFDFGVSVDGFWRVLISVMMGCLACFMFIPAIRS 233

Query: 241 ARCFWLGTDQIRCNLSMITCGWFASTILYANQLLVIFVALLWITPLSEIFV----NTNYN 296
           AR FWLGTDQIRCNLSMITCG+F  TILY NQ+L+IFVAL+WITPL+EIFV    N +  
Sbjct: 234 ARSFWLGTDQIRCNLSMITCGFFNRTILYVNQILLIFVALMWITPLAEIFVNKNYNNSNG 293

Query: 297 NNKGGSGIGSAEKLVGNLGFLPSDFSNFRRWCLLGSSLLQIVAVRLNLQMYLNEALLSWY 356
           N+   SG+G+ E++VGN+GF PSDF NFRRWCLLGSSLLQIVA+R NLQMYLNEALLSWY
Sbjct: 294 NSATRSGVGNVERVVGNVGFSPSDFDNFRRWCLLGSSLLQIVALRANLQMYLNEALLSWY 353

Query: 357 QRLHVSKVPDLDYSRAKMFLHNHYVCLVVLQFLGPPMLVLVFLGLSQIDSPSFGNLPSIL 416
           QRLH  KVP+LDYSRAKMFLHNHY+CLVVLQFLGPP+LVL FLGLSQID PSF N P  L
Sbjct: 354 QRLHGGKVPELDYSRAKMFLHNHYLCLVVLQFLGPPVLVLTFLGLSQIDGPSFENFPLAL 413

Query: 417 PSSTFVKEVALFFAWWVNFLWAIYSSVILMLHRHCILYVS 456
           P S F KEVALF AWWV FLWAI+SSVIL+LHRHCILYVS
Sbjct: 414 PGSAFFKEVALFLAWWVTFLWAIFSSVILLLHRHCILYVS 453