Miyakogusa Predicted Gene
- Lj0g3v0092039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0092039.1 tr|F2EGT7|F2EGT7_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,33.48,6e-16,Tmemb_161AB,Transmembrane protein 161A/B;
seg,NULL,CUFF.5026.1
(1372 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423517 weakly similar to UniRef100_A7QVH3 Cluster: Ch... 896 0.0
gnl|LJGI|AV765088 weakly similar to UniRef100_A7QVH3 Cluster: Ch... 254 1e-66
>gnl|LJGI|AV423517 weakly similar to UniRef100_A7QVH3 Cluster: Chromosome chr16
scaffold_189, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_189, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 467
Score = 896 bits (452), Expect = 0.0
Identities = 461/464 (99%)
Strand = Plus / Plus
Query: 119 cctacatccaccccgattcccaaccccaatccaatggcctcagagccgccattcgccgcc 178
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 cctacatccaccccgattcccaaccccaatccaatggcctcagagccgacattcgccgcc 63
Query: 179 ccgggatcgacaactaccaacccttatcctccaaaacctccgcagagctcaggaagagaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccgggatcgacaactaccaacccttatcctccaaaacctccgcagagctcaggaagagaa 123
Query: 239 gcaaggccaaggacaaggtcgatttcgacgaaaacaatgctcagatcttcaggctgagac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcaaggccaaggacaaggtcgatttcgacgaaaacaatgctcagatcttcaggctgagac 183
Query: 299 tcgatgagggtcaccttcaatctcgtctctatgttgatcagtattgtgctgctttcaccg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcgatgagggtcaccttcaatctcgtctctatgttgatcagtattgtgctgctttcaccg 243
Query: 359 tttcctttgttgcccttttctctattttggttcacagcttcttagattcgaaggaggatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tttcctttgttgcccttttctctattttggttcacagcttcttagattcgaaggaggatc 303
Query: 419 atgggttattgaaaactggggttatagttccgattctgttatcaattttgagtctttact 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atgggttattgaaaactggggttatagttccgattctgttatcaattttgagtctttact 363
Query: 479 cgtggggttcgacgcttgcgaagaccgcgttcgagcgatccgcgtctaggcggtcggaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgtggggttcgacgcttgcgaagaccgcgttcgagcgatccgcgtctaggcggtcggaga 423
Query: 539 agcaattgagcattgtttttggggttttgggggttttcttaggg 582
||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 424 agcaattgagcattgtttttggggtatcgggggttttcttaggg 467
>gnl|LJGI|AV765088 weakly similar to UniRef100_A7QVH3 Cluster: Chromosome chr16
scaffold_189, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_189, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 311
Score = 254 bits (128), Expect = 1e-66
Identities = 149/156 (95%)
Strand = Plus / Minus
Query: 1217 gtccttcctttggaaatttaccatctatactgccgagctctacttttgtcaaggaagttg 1276
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 311 gtccttcctttggaaattgcccatctatactaccgagctctacttttgtcaaggaagtag 252
Query: 1277 ctttgttttttgcttggtgggttaactttctgtgggcaatatactcttcagtgatcctta 1336
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 251 ctttgttttttgcttggtgggtaaactttctgtgggcaataaactcttcagtgatcctta 192
Query: 1337 tgctacatcgccattgtattttatatgtttcttgag 1372
|||||||||||||||| |||||||||||||||||||
Sbjct: 191 tgctacatcgccattgaattttatatgtttcttgag 156