Miyakogusa Predicted Gene
- Lj0g3v0054449.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LM07_SOYBN |
86.7 |
59.7 |
65.3 |
(tr|I1LM07) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G58240.1 |
63.5 |
44.3 |
55.7 |
| Symbols: FHIT | FRAGILE HISTIDINE TRIAD | chr5:23558349-23559313 REVERSE LENGTH=180 |
| Medicago |
Medtr3g063030.1 |
83.6 |
56.9 |
63.9 |
| bis(5-adenosyl)-triphosphatase-like protein | HC | chr3:28522385-28523917 | 20130731 |
| Soybean |
Glyma11g31700.1 |
87.0 |
59.7 |
65.3 |
|
| LJGI |
gnl|LJGI|TC66720 |
478 |
99.6 |
99.6 |
similar to UniRef100_Q5YJN3 Cluster: Diadenosine tetraphosphate hydrolase; n=1; Hyacinthus orientalis|Rep: Diadenosine tetraphosphate hydrolase - Hyacinthus orientalis (Common hyacinth), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0054449.1 |
length: 82 aa. |
| IPR001310 |
Histidine triad (HIT) protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR23089 |
HISTIDINE |
2.9e-15 |
12-72 |
| HMMPfam |
PF01230 |
HIT |
3.3e-05 |
5-32 |
| IPR011146 |
HIT-like domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.30.428.10 |
no description |
1e-19 |
6-79 |
| ProfileScan |
PS51084 |
HIT_2 |
11.995 |
1-37 |
| superfamily |
SSF54197 |
HIT-like |
8.3e-13 |
12-81 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
42-74 |
| HMMPanther |
PTHR23089:SF0 |
SUBFAMILY |
2.9e-15 |
12-72 |
| Seg |
seg |
seg |
NA |
34-57 |
- Wolf-PSORT
Lj0g3v0054449.1 cyto 5, nucl 4, pero 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0054449.1 |
|