Miyakogusa Predicted Gene

Lj0g3v0054449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054449.1 tr|F2CTL2|F2CTL2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,67.14,2e-17,SUBFAMILY NOT
NAMED,NULL; HISTIDINE TRIAD (HIT) PROTEIN,Histidine triad (HIT)
protein; no descriptio,CUFF.2406.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g31700.1                                                        87   4e-18
Glyma18g05580.1                                                        85   2e-17
Glyma18g05590.1                                                        78   2e-15
Glyma11g31690.1                                                        76   6e-15

>Glyma11g31700.1 
          Length = 161

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 47/72 (65%)

Query: 11  KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEEM 70
           +DGPQAGQSVPHVHIH+LPRKSG                        VDIERKDRS++EM
Sbjct: 90  QDGPQAGQSVPHVHIHILPRKSGDYENNDDIYDDINEKEKELNRALKVDIERKDRSIQEM 149

Query: 71  AQEADEYRKFVF 82
           A EADEYRKFVF
Sbjct: 150 ALEADEYRKFVF 161


>Glyma18g05580.1 
          Length = 114

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 3   HHHLHSVS---KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVD 59
           +H   S+S   +DGPQAGQ+VPHVHIH+LP KSG                        VD
Sbjct: 32  YHKASSLSFGIQDGPQAGQTVPHVHIHILPWKSGDYENNDDIYDDMNEKEKELNRALKVD 91

Query: 60  IERKDRSLEEMAQEADEYRKFVF 82
           +ERKDRS+EEMA EADEYRKFVF
Sbjct: 92  VERKDRSIEEMALEADEYRKFVF 114


>Glyma18g05590.1 
          Length = 192

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 44/72 (61%)

Query: 11  KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEEM 70
           +DGPQAGQ+VPHVHIHL+PRKSG                        +D ERKDRSLEEM
Sbjct: 121 QDGPQAGQTVPHVHIHLIPRKSGDFEKNDEIYDAVDEKEKELKQKLDLDKERKDRSLEEM 180

Query: 71  AQEADEYRKFVF 82
           +QEADEYRK   
Sbjct: 181 SQEADEYRKLFL 192


>Glyma11g31690.1 
          Length = 150

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 43/72 (59%)

Query: 11  KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEEM 70
           +DGPQAGQ VPHVHIHL+PRKSG                        +D ERKDRSLE+M
Sbjct: 79  QDGPQAGQMVPHVHIHLIPRKSGDFEKNDEIYDAIDEKEKELKQKLDLDKERKDRSLEDM 138

Query: 71  AQEADEYRKFVF 82
           +QEADEYRK   
Sbjct: 139 SQEADEYRKLFL 150