Miyakogusa Predicted Gene

Lj0g3v0054449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054449.1 tr|F2CTL2|F2CTL2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,67.14,2e-17,SUBFAMILY NOT
NAMED,NULL; HISTIDINE TRIAD (HIT) PROTEIN,Histidine triad (HIT)
protein; no descriptio,CUFF.2406.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063030.1 | bis(5-adenosyl)-triphosphatase-like protein | ...    84   4e-17
Medtr3g062950.1 | bis(5-adenosyl)-triphosphatase-like protein | ...    74   2e-14
Medtr3g062940.1 | bis(5'-adenosyl)-triphosphatase | HC | chr3:28...    68   2e-12

>Medtr3g063030.1 | bis(5-adenosyl)-triphosphatase-like protein | HC
           | chr3:28522385-28523917 | 20130731
          Length = 161

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 46/72 (63%)

Query: 11  KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEEM 70
           +DGPQAGQSVPHVHIH+LPRK+G                        VD+ERKDRSL+EM
Sbjct: 90  QDGPQAGQSVPHVHIHILPRKNGDFENNDDIYDLINEKEKELKRKLAVDLERKDRSLDEM 149

Query: 71  AQEADEYRKFVF 82
           AQEAD YRKFV 
Sbjct: 150 AQEADAYRKFVL 161


>Medtr3g062950.1 | bis(5-adenosyl)-triphosphatase-like protein | HC
           | chr3:28456388-28458534 | 20130731
          Length = 166

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 46/73 (63%), Gaps = 5/73 (6%)

Query: 11  KDGPQAGQSVPHVHIHLLP-RKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEE 69
           +DGPQAGQSVPHVHIH+LP  K+G                        VDIERKDRSLEE
Sbjct: 97  QDGPQAGQSVPHVHIHILPYWKNGDFENNDEINEKEKELKRKVV----VDIERKDRSLEE 152

Query: 70  MAQEADEYRKFVF 82
           MAQEA+EYRKFV 
Sbjct: 153 MAQEANEYRKFVI 165


>Medtr3g062940.1 | bis(5'-adenosyl)-triphosphatase | HC |
           chr3:28452849-28455214 | 20130731
          Length = 196

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 43/72 (59%)

Query: 11  KDGPQAGQSVPHVHIHLLPRKSGXXXXXXXXXXXXXXXXXXXXXXXXVDIERKDRSLEEM 70
           +DGPQAGQ+VPHVHIH++PRK G                        +D ERKDRSLEEM
Sbjct: 125 QDGPQAGQTVPHVHIHVVPRKGGDFKNNDEIYDAMDEKEKELKEKLDLDKERKDRSLEEM 184

Query: 71  AQEADEYRKFVF 82
           +QEA+EYRK   
Sbjct: 185 SQEAEEYRKLFL 196