SLC35D1 ORF clone pFN21AA0260

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Halotag ORF Clone pFN21AA0260

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Clone info.

Species

human

Clone Name

pFN21AA0260 Sequence (with vector) Restriction Map

Product ID

FHC01063

Flexi Clone PID

FXC01063

ORF Sequence

DNA sequence (1065 bp)
Protein sequence (355 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385301]

Gene

KIAA0260

Symbol

SLC35D1

Alias : SHNKND, UGTREL7

Description

solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1

Original Clone ID

ha07062

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1065 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 355 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS636.1 1.5e-161 100.0 SLC35D1 CCDS6717.1 1.7e-85 57.7 SLC35D2 CCDS69625.1 5.4e-33 40.0 SLC35D2 CCDS34544.1 1.2e-17 28.4 SLC35D3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004853 201 329 PF03151 Domain of unknown function DUF250
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 36 TLTVFLKLLAAGFYGVSSFLIVV 58 SECONDARY 23 2 71 SSLCVGLGQMVATVAVLWVGKAL 93 PRIMARY 23 3 109 TFPLPLLYFGNQITGLFST 127 SECONDARY 19 4 131 NLPMFTVLRRFSILFTMFAEGVL 153 SECONDARY 23 5 158 FSWGIKMTVFAMIIGAFVAASSD 180 PRIMARY 23 6 184 DLEGYAFILINDVLTAANGAYVK 206 SECONDARY 23 7 217 YGLLYYNALFMILPTLAIAYFTG 239 SECONDARY 23 8 253 TLFLLQFTLSCVMGFILMYATVL 275 PRIMARY 23 9 283 LTTTIVGCIKNILITYIGMVFGG 305 SECONDARY 23 10 312 TNFIGLNISIAGSLVYSYITFTE 334 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055954 355 269250,610804 100.0 100.0 XP_006710541 382 269250,610804 92.9 100.0 XP_011539372 382 269250,610804 92.9 100.0 NP_008932 337 609182 57.7 87.0 XP_005251732 290 609182 49.7 87.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA0260 Download

>KIAA0260  1065 bp
ATGGCGGAAGTTCATAGACGTCAGCATGCTCGGGTTAAAGGAGAAGCCCCCGCGAAATCC
TCCACACTCCGAGATGAGGAGGAGCTGGGGATGGCGTCGGCCGAAACGCTGACCGTGTTT
CTGAAGCTGCTGGCCGCCGGCTTTTACGGCGTGAGCTCCTTCCTGATCGTGGTGGTGAAT
AAGAGCGTGCTCACCAATTACAGATTTCCCTCCTCACTATGTGTTGGACTTGGCCAGATG
GTGGCCACAGTGGCAGTTCTCTGGGTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGAC
CTTGACAGAAATGTACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAA
ATCACGGGACTGTTCAGCACAAAGAAACTGAACTTGCCAATGTTTACAGTTCTGAGAAGG
TTCTCCATCCTGTTTACAATGTTTGCTGAAGGAGTTTTACTCAAGAAGACTTTTTCTTGG
GGTATTAAAATGACTGTATTTGCAATGATTATTGGAGCCTTTGTAGCTGCCAGCTCTGAC
TTGGCATTTGATCTGGAAGGATATGCTTTTATTCTGATAAACGATGTCCTAACAGCAGCA
AATGGTGCATACGTAAAACAAAAATTAGATTCAAAAGAGCTGGGAAAATATGGACTGCTC
TATTACAATGCACTGTTCATGATTCTGCCCACCCTGGCCATTGCGTATTTCACAGGAGAT
GCACAAAAGGCTGTGGAGTTTGAAGGCTGGGCTGACACCCTCTTTCTTCTGCAGTTCACC
CTCTCCTGTGTGATGGGGTTTATCTTAATGTACGCCACAGTACTCTGCACGCAGTATAAT
TCTGCTCTTACAACTACAATAGTTGGCTGTATTAAGAATATATTAATAACTTATATTGGA
ATGGTCTTTGGTGGAGATTATATTTTCACGTGGACAAACTTCATTGGTTTAAATATCAGC
ATTGCTGGGAGCCTGGTATATTCCTATATCACTTTCACTGAAGAGCAGCTGAGCAAACAG
TCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTG

ORF Protein

Cloned ORF protein sequence for pFN21AA0260 Download

>KIAA0260  355 aa
MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN
KSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ
ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSD
LAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGD
AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG
MVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGKGAV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA0260 Download

>pFN21AA0260  5770 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGAAGTTCATAGACGTCAGCATGCTCGGGT
TAAAGGAGAAGCCCCCGCGAAATCCTCCACACTCCGAGATGAGGAGGAGCTGGGGATGGC
GTCGGCCGAAACGCTGACCGTGTTTCTGAAGCTGCTGGCCGCCGGCTTTTACGGCGTGAG
CTCCTTCCTGATCGTGGTGGTGAATAAGAGCGTGCTCACCAATTACAGATTTCCCTCCTC
ACTATGTGTTGGACTTGGCCAGATGGTGGCCACAGTGGCAGTTCTCTGGGTGGGAAAGGC
GCTCAGAGTAGTCAAGTTTCCTGACCTTGACAGAAATGTACCTCGAAAGACGTTTCCACT
ACCTCTACTATATTTTGGGAACCAAATCACGGGACTGTTCAGCACAAAGAAACTGAACTT
GCCAATGTTTACAGTTCTGAGAAGGTTCTCCATCCTGTTTACAATGTTTGCTGAAGGAGT
TTTACTCAAGAAGACTTTTTCTTGGGGTATTAAAATGACTGTATTTGCAATGATTATTGG
AGCCTTTGTAGCTGCCAGCTCTGACTTGGCATTTGATCTGGAAGGATATGCTTTTATTCT
GATAAACGATGTCCTAACAGCAGCAAATGGTGCATACGTAAAACAAAAATTAGATTCAAA
AGAGCTGGGAAAATATGGACTGCTCTATTACAATGCACTGTTCATGATTCTGCCCACCCT
GGCCATTGCGTATTTCACAGGAGATGCACAAAAGGCTGTGGAGTTTGAAGGCTGGGCTGA
CACCCTCTTTCTTCTGCAGTTCACCCTCTCCTGTGTGATGGGGTTTATCTTAATGTACGC
CACAGTACTCTGCACGCAGTATAATTCTGCTCTTACAACTACAATAGTTGGCTGTATTAA
GAATATATTAATAACTTATATTGGAATGGTCTTTGGTGGAGATTATATTTTCACGTGGAC
AAACTTCATTGGTTTAAATATCAGCATTGCTGGGAGCCTGGTATATTCCTATATCACTTT
CACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAA
AGGAGCAGTGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT