USP50 ORF clone pF1KB7359

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB7359

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Clone info.

Species

human

Clone Name

pF1KB7359 Sequence (with vector) Restriction Map

Product ID

FXC02389

HaloTag Clone PID

FHC02389

ORF Sequence

DNA sequence (1017 bp)
Protein sequence (339 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464334]

Gene

KIBB7359

Symbol

USP50

Description

ubiquitin specific peptidase 50

Original Clone ID

oc00573

Features of the cloned ORF sequence

Description

Length: 1017 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 339 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53944.1 1.7e-124 98.2 USP50 CCDS61632.1 2.2e-35 37.8 USP8 CCDS10137.1 2.4e-35 37.8 USP8 CCDS58189.1 1.7e-18 34.9 USP2 CCDS8423.1 4.4e-18 35.3 USP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001394 41 335 PF00443 Peptidase C19 ProfileScan IPR001394 44 339 PS50235 Peptidase C19
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016878211 928 603158 37.8 88.8 XP_016878210 928 603158 37.8 88.8 NP_001269978 1012 603158 37.8 88.8 XP_016878207 1089 603158 37.8 88.8 XP_006720825 1089 603158 37.8 88.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7359 Download

>KIBB7359  1017 bp
ATGACTTCTCAGCCGTCTCTCCCTGCAGATGACTTCGATATCTACCACGTCCTTGCAGAG
TGCACAGATTACTATGATACCCTTCCAGTTAAGGAGGCTGATGGGAACCAGCCCCATTTT
CAGGGTGTCACTGGCTTGTGGAACTTGGGCAACACATGCTGCGTGAATGCCATCTCACAG
TGTCTCTGCAGCATCTTGCCGCTGGTGGAATACTTTCTCACCGGGAAGTATATCACCGCT
CTGCAAAAGTTTCTTCTTCCAAGCGATTGCAGTGAAGTTGCCACTGCTTTTGCCTATCTG
ATGACAGACATGTGGCTGGGAGACTCAGACTGTGTCTCACCAGAAATATTCTGGTCAGCT
CTTGGCAACCTCTACCCAGCATTTACGAAAAAGATGCAACAAGATGCTCAGGAATTCTTG
ATTTGTGTCCTAAATGAACTTCATGAAGCTCTAAAAAAGTACCACTACTCCCGGAGAAGA
TCATATGAGAAAGGATCTACTCAGAGATGCTGCAGGAAGTGGATTACCACTGAGACATCC
ATCATCACCCAGCTGTTTGAAGAGCAGCTCAATTATAGCATCGTATGTTTAAAGTGTGAG
AAATGCACCTACAAGAACGAAGTCTTCACTGTCTTCTCACTCCCCATTCCATCCAAATAT
GAATGCTCCCTTCGGGACTGTCTCCAATGTTTTTTTCAACAAGACGCACTGACCTGGAAC
AACGAAATTCACTGCTCCTTTTGTGAAACCAAGCAAGAAACTGCTGTGAGGGCCAGTATT
TCCAAAGCACCAAAAATAATTATTTTCCACCTAAAAAGGTTTGACATTCAGGGTACAACA
AAAAGGAAGCTGAGAACGGATATTCATTACCCACTCACTAACTTGGACCTCACTCCTTAT
ATTTGCTCAATTTTCCGGAAATATCCTAAATACAACCTCTGTGCAGTGGTGAACCATTTT
GGTGATTTGGATGGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCC

ORF Protein

Cloned ORF protein sequence for pF1KB7359 Download

>KIBB7359  339 aa
MTSQPSLPADDFDIYHVLAECTDYYDTLPVKEADGNQPHFQGVTGLWNLGNTCCVNAISQ
CLCSILPLVEYFLTGKYITALQKFLLPSDCSEVATAFAYLMTDMWLGDSDCVSPEIFWSA
LGNLYPAFTKKMQQDAQEFLICVLNELHEALKKYHYSRRRSYEKGSTQRCCRKWITTETS
IITQLFEEQLNYSIVCLKCEKCTYKNEVFTVFSLPIPSKYECSLRDCLQCFFQQDALTWN
NEIHCSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPY
ICSIFRKYPKYNLCAVVNHFGDLDGGHYTAFCKNSVTQA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7359 Download

>pF1KB7359  4130 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACTTCTCAG
CCGTCTCTCCCTGCAGATGACTTCGATATCTACCACGTCCTTGCAGAGTGCACAGATTAC
TATGATACCCTTCCAGTTAAGGAGGCTGATGGGAACCAGCCCCATTTTCAGGGTGTCACT
GGCTTGTGGAACTTGGGCAACACATGCTGCGTGAATGCCATCTCACAGTGTCTCTGCAGC
ATCTTGCCGCTGGTGGAATACTTTCTCACCGGGAAGTATATCACCGCTCTGCAAAAGTTT
CTTCTTCCAAGCGATTGCAGTGAAGTTGCCACTGCTTTTGCCTATCTGATGACAGACATG
TGGCTGGGAGACTCAGACTGTGTCTCACCAGAAATATTCTGGTCAGCTCTTGGCAACCTC
TACCCAGCATTTACGAAAAAGATGCAACAAGATGCTCAGGAATTCTTGATTTGTGTCCTA
AATGAACTTCATGAAGCTCTAAAAAAGTACCACTACTCCCGGAGAAGATCATATGAGAAA
GGATCTACTCAGAGATGCTGCAGGAAGTGGATTACCACTGAGACATCCATCATCACCCAG
CTGTTTGAAGAGCAGCTCAATTATAGCATCGTATGTTTAAAGTGTGAGAAATGCACCTAC
AAGAACGAAGTCTTCACTGTCTTCTCACTCCCCATTCCATCCAAATATGAATGCTCCCTT
CGGGACTGTCTCCAATGTTTTTTTCAACAAGACGCACTGACCTGGAACAACGAAATTCAC
TGCTCCTTTTGTGAAACCAAGCAAGAAACTGCTGTGAGGGCCAGTATTTCCAAAGCACCA
AAAATAATTATTTTCCACCTAAAAAGGTTTGACATTCAGGGTACAACAAAAAGGAAGCTG
AGAACGGATATTCATTACCCACTCACTAACTTGGACCTCACTCCTTATATTTGCTCAATT
TTCCGGAAATATCCTAAATACAACCTCTGTGCAGTGGTGAACCATTTTGGTGATTTGGAT
GGTGGCCACTACACTGCTTTCTGCAAGAATTCAGTCACCCAGGCCGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT