PPARGC1A ORF clone FXC21879

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Flexi ORF Clone FXC21879

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Clone info.

Species

human

Clone Name

pF1KB6281 Sequence (with vector) Restriction Map

Product ID

FXC21879

HaloTag Clone PID

FHC21879

ORF Sequence

DNA sequence (2394 bp)
Protein sequence (798 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB6281

Symbol

PPARGC1A

Alias : LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A, PPARGC1

Description

peroxisome proliferator-activated receptor gamma, coactivator 1 alpha

Original Clone ID

cs00881

Note

We obtained this clone using the E.coli strain DH10B at 25 deg C.

Features of the cloned ORF sequence

Description

Length: 2394 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 798 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3429.1 1.7e-190 100.0 PPARGC1A CCDS7529.1 4.4e-19 29.8 PPRC1 CCDS73186.1 4.9e-17 31.5 PPRC1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 679 739 PF00076 RNA recognition motif domain HMMSmart IPR000504 678 747 SM00360 RNA recognition motif domain ProfileScan IPR000504 677 753 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037393 798 604517 100.0 100.0 XP_005248189 795 604517 99.4 98.6 NP_001317680 803 604517 98.5 99.7 XP_005248188 802 604517 99.4 98.5 NP_001317681 786 604517 100.0 97.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6281 Download

>KIBB6281  2394 bp
ATGGCGTGGGACATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTGTGCT
GCTCTGGTTGGTGAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTTGATCTTTCTGAA
CTAGATGTGAACGACTTGGATACAGACAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGAC
CAATCAGAAATAATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGAAGATA
GATGAAGAGAATGAGGCAAACTTGCTAGCAGTCCTCACAGAGACACTAGACAGTCTCCCT
GTGGATGAAGACGGATTGCCCTCATTTGATGCGCTGACAGATGGAGACGTGACCACTGAC
AATGAGGCTAGTCCTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAAGAG
CCGTCTCTACTTAAGAAGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTTATAATGAA
TGCAGTGGTCTCAGTACCCAGAACCATGCAAATCACAATCACAGGATCAGAACAAACCCT
GCAATTGTTAAGACTGAGAATTCATGGAGCAATAAAGCGAAGAGTATTTGTCAACAGCAA
AAGCCACAAAGACGTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAACGATGACCCT
CCTCACACCAAACCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAAG
AAGTCCCACACACAGTCGCAGTCACAACACTTACAAGCCAAACCAACAACTTTATCTCTT
CCTCTGACCCCAGAGTCACCAAATGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATT
GAACGCACCTTAAGTGTGGAACTCTCTGGAACTGCAGGCCTAACTCCACCCACCACTCCT
CCTCATAAAGCCAACCAAGATAACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCTTGC
AAGACTGTGGTGCCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAA
GGCAATAACTCCACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAG
TCCTCAGTCCTCACTGGTGGACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTG
TTTGGTGACCATGACTATTGCCAGTCAATTAATTCCAAAACAGAAATACTCATTAATATA
TCACAGGAGCTCCAAGACTCTAGACAACTAGAAAATAAAGATGTCTCCTCTGATTGGCAG
GGGCAGATTTGTTCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCA
AGCAAGCAGGTCTCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGAGCC
GAGCTGAACAAGCACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAG
ACCGGTGAACTGAGGGACAGTGATTTCAGTAATGAACAATTCTCCAAACTACCTATGTTT
ATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGACAGCGAAGATGAAAGTGATAAA
CTGAGCTACCCTTGGGATGGCACGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTTGT
TCTTCTTTTAACTCTCCATGTAGAGATTCTGTGTCACCACCCAAATCCTTATTTTCTCAA
AGACCCCAAAGGATGCGCTCTCGTTCAAGGTCCTTTTCTCGACACAGGTCGTGTTCCCGA
TCACCATATTCCAGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGC
TATTACTATGAGTCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTG
AGATCACGTTCAAGATCGCCCTACAGCCGTCGGCCCAGGTATGACAGCTACGAGGAATAT
CAGCACGAGAGGCTGAAGAGGGAAGAATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAG
AGGGCCAAGCAAAGGGAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTGTGATTTAT
GTCGGTAAAATCAGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTT
GGTGAAATTGAGGAGTGCACAGTAAATCTGCGGGATGATGGAGACAGCTATGGTTTCATT
ACCTACCGTTATACCTGTGATGCTTTTGCTGCTCTTGAAAATGGATACACTTTGCGCAGG
TCAAACGAAACTGACTTTGAGCTGTACTTTTGTGGACGCAAGCAATTTTTCAAGTCTAAC
TATGCAGACCTAGATTCAAACTCAGATGACTTTGACCCTGCTTCCACCAAGAGCAAGTAT
GACTCTCTGGATTTTGATAGTTTACTGAAAGAAGCTCAGAGAAGCTTGCGCAGG

ORF Protein

Cloned ORF protein sequence for pF1KB6281 Download

>KIBB6281  798 aa
MAWDMCNQDSESVWSDIECAALVGEDQPLCPDLPELDLSELDVNDLDTDSFLGGLKWCSD
QSEIISNQYNNEPSNIFEKIDEENEANLLAVLTETLDSLPVDEDGLPSFDALTDGDVTTD
NEASPSSMPDGTPPPQEAEEPSLLKKLLLAPANTQLSYNECSGLSTQNHANHNHRIRTNP
AIVKTENSWSNKAKSICQQQKPQRRPCSELLKYLTTNDDPPHTKPTENRNSSRDKCTSKK
KSHTQSQSQHLQAKPTTLSLPLTPESPNDPKGSPFENKTIERTLSVELSGTAGLTPPTTP
PHKANQDNPFRASPKLKSSCKTVVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSK
SSVLTGGHEERKTKRPSLRLFGDHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQ
GQICSSTDSDQCYLRETLEASKQVSPCSTRKQLQDQEIRAELNKHFGHPSQAVFDDEADK
TGELRDSDFSNEQFSKLPMFINSGLAMDGLFDDSEDESDKLSYPWDGTQSYSLFNVSPSC
SSFNSPCRDSVSPPKSLFSQRPQRMRSRSRSFSRHRSCSRSPYSRSRSRSPGSRSSSRSC
YYYESSHYRHRTHRNSPLYVRSRSRSPYSRRPRYDSYEEYQHERLKREEYRREYEKRESE
RAKQRERQRQKAIEERRVIYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFI
TYRYTCDAFAALENGYTLRRSNETDFELYFCGRKQFFKSNYADLDSNSDDFDPASTKSKY
DSLDFDSLLKEAQRSLRR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6281 Download

>pF1KB6281  5507 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGTGGGAC
ATGTGCAACCAGGACTCTGAGTCTGTATGGAGTGACATCGAGTGTGCTGCTCTGGTTGGT
GAAGACCAGCCTCTTTGCCCAGATCTTCCTGAACTTGATCTTTCTGAACTAGATGTGAAC
GACTTGGATACAGACAGCTTTCTGGGTGGACTCAAGTGGTGCAGTGACCAATCAGAAATA
ATATCCAATCAGTACAACAATGAGCCTTCAAACATATTTGAGAAGATAGATGAAGAGAAT
GAGGCAAACTTGCTAGCAGTCCTCACAGAGACACTAGACAGTCTCCCTGTGGATGAAGAC
GGATTGCCCTCATTTGATGCGCTGACAGATGGAGACGTGACCACTGACAATGAGGCTAGT
CCTTCCTCCATGCCTGACGGCACCCCTCCACCCCAGGAGGCAGAAGAGCCGTCTCTACTT
AAGAAGCTCTTACTGGCACCAGCCAACACTCAGCTAAGTTATAATGAATGCAGTGGTCTC
AGTACCCAGAACCATGCAAATCACAATCACAGGATCAGAACAAACCCTGCAATTGTTAAG
ACTGAGAATTCATGGAGCAATAAAGCGAAGAGTATTTGTCAACAGCAAAAGCCACAAAGA
CGTCCCTGCTCGGAGCTTCTCAAATATCTGACCACAAACGATGACCCTCCTCACACCAAA
CCCACAGAGAACAGAAACAGCAGCAGAGACAAATGCACCTCCAAAAAGAAGTCCCACACA
CAGTCGCAGTCACAACACTTACAAGCCAAACCAACAACTTTATCTCTTCCTCTGACCCCA
GAGTCACCAAATGACCCCAAGGGTTCCCCATTTGAGAACAAGACTATTGAACGCACCTTA
AGTGTGGAACTCTCTGGAACTGCAGGCCTAACTCCACCCACCACTCCTCCTCATAAAGCC
AACCAAGATAACCCTTTTAGGGCTTCTCCAAAGCTGAAGTCCTCTTGCAAGACTGTGGTG
CCACCACCATCAAAGAAGCCCAGGTACAGTGAGTCTTCTGGTACACAAGGCAATAACTCC
ACCAAGAAAGGGCCGGAGCAATCCGAGTTGTATGCACAACTCAGCAAGTCCTCAGTCCTC
ACTGGTGGACACGAGGAAAGGAAGACCAAGCGGCCCAGTCTGCGGCTGTTTGGTGACCAT
GACTATTGCCAGTCAATTAATTCCAAAACAGAAATACTCATTAATATATCACAGGAGCTC
CAAGACTCTAGACAACTAGAAAATAAAGATGTCTCCTCTGATTGGCAGGGGCAGATTTGT
TCTTCCACAGATTCAGACCAGTGCTACCTGAGAGAGACTTTGGAGGCAAGCAAGCAGGTC
TCTCCTTGCAGCACAAGAAAACAGCTCCAAGACCAGGAAATCCGAGCCGAGCTGAACAAG
CACTTCGGTCATCCCAGTCAAGCTGTTTTTGACGACGAAGCAGACAAGACCGGTGAACTG
AGGGACAGTGATTTCAGTAATGAACAATTCTCCAAACTACCTATGTTTATAAATTCAGGA
CTAGCCATGGATGGCCTGTTTGATGACAGCGAAGATGAAAGTGATAAACTGAGCTACCCT
TGGGATGGCACGCAATCCTATTCATTGTTCAATGTGTCTCCTTCTTGTTCTTCTTTTAAC
TCTCCATGTAGAGATTCTGTGTCACCACCCAAATCCTTATTTTCTCAAAGACCCCAAAGG
ATGCGCTCTCGTTCAAGGTCCTTTTCTCGACACAGGTCGTGTTCCCGATCACCATATTCC
AGGTCAAGATCAAGGTCTCCAGGCAGTAGATCCTCTTCAAGATCCTGCTATTACTATGAG
TCAAGCCACTACAGACACCGCACGCACCGAAATTCTCCCTTGTATGTGAGATCACGTTCA
AGATCGCCCTACAGCCGTCGGCCCAGGTATGACAGCTACGAGGAATATCAGCACGAGAGG
CTGAAGAGGGAAGAATATCGCAGAGAGTATGAGAAGCGAGAGTCTGAGAGGGCCAAGCAA
AGGGAGAGGCAGAGGCAGAAGGCAATTGAAGAGCGCCGTGTGATTTATGTCGGTAAAATC
AGACCTGACACAACACGGACAGAACTGAGGGACCGTTTTGAAGTTTTTGGTGAAATTGAG
GAGTGCACAGTAAATCTGCGGGATGATGGAGACAGCTATGGTTTCATTACCTACCGTTAT
ACCTGTGATGCTTTTGCTGCTCTTGAAAATGGATACACTTTGCGCAGGTCAAACGAAACT
GACTTTGAGCTGTACTTTTGTGGACGCAAGCAATTTTTCAAGTCTAACTATGCAGACCTA
GATTCAAACTCAGATGACTTTGACCCTGCTTCCACCAAGAGCAAGTATGACTCTCTGGAT
TTTGATAGTTTACTGAAAGAAGCTCAGAGAAGCTTGCGCAGGGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT