SCARA3 ORF clone FXC11923

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Flexi ORF Clone FXC11923

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Clone info.

Species

human

Clone Name

pF1KE1097 Sequence (with vector) Restriction Map

Product ID

FXC11923

HaloTag Clone PID

FHC11923

ORF Sequence

DNA sequence (1818 bp)
Protein sequence (606 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587561]

Gene

KIEE1097

Symbol

SCARA3

Alias : APC7, CSR, CSR1, MSLR1, MSRL1

Description

scavenger receptor class A, member 3, transcript variant 1

Original Clone ID

cp00681

Features of the cloned ORF sequence

Description

Length: 1818 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 606 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34871.1 2.8e-98 100.0 SCARA3 CCDS34870.1 2.1e-69 100.0 SCARA3 CCDS32782.1 1.6e-26 35.0 COLEC12 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR008160 456 511 PF01391 Collagen triple helix repeat IPR008160 500 557 PF01391 Collagen triple helix repeat IPR008160 544 602 PF01391 Collagen triple helix repeat
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 56 RILYLFLALLLVAVAVLASLVF 77 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016869024 606 602728 100.0 100.0 NP_057324 606 602728 100.0 100.0 XP_016869026 483 602728 95.3 80.2 NP_569057 742 607621 35.0 96.5 XP_011524043 725 607621 35.6 93.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE1097 Download

>KIEE1097  1818 bp
ATGAAAGTGAGGTCGGCCGGCGGCGATGGAGATGCCTTGTGCGTTACAGAAGAGGACCTG
GCGGGTGACGACGAGGACATGCCGACCTTCCCATGCACCCAGAAGGGCCGGCCAGGGCCC
CGCTGCAGCCGCTGCCAGAAGAACCTATCTTTGCACACATCGGTGCGGATTCTTTACCTC
TTCCTGGCCCTGCTCCTGGTGGCCGTGGCTGTGTTGGCCTCTCTGGTTTTCAGAAAAGTG
GACTCTCTCTCCGAAGACATCTCCTTGACCCAGTCTATTTATGACAAGAAGCTTGTGTTA
ATGCAGAAAAATCTCCAGGGCCTGGATCCGAAAGCCCTGAACAACTGCTCTTTCTGCCAT
GAAGCTGGGCAGCTGGGGCCAGAGATCCGAAAACTGCAGGAGGAGCTGGAGGGAATTCAG
AAGCTGCTTCTGGCCCAGGAGGTGCAGCTGGACCAGACCTTACAGGCCCAGGAGGTGCTC
TCCACCACCAGCAGACAAATCTCCCAGGAGATGGGCAGTTGCTCCTTCTCCATCCACCAG
GTTAACCAGTCTCTGGGGCTCTTCCTGGCCCAGGTGAGAGGCTGGCAGGCCACCACAGCT
GGCCTGGACCTCTCTCTGAAGGACCTCACCCAGGAGTGCTACGATGTCAAGGCTGCAGTG
CACCAGATCAACTTCACCGTGGGGCAGACTTCCGAGTGGATCCACGGGATCCAGCGGAAG
ACAGACGAGGAGACCCTGACCCTCCAGAAGATTGTCACCGACTGGCAGAACTACACACGG
CTCTTCAGCGGCCTGCGCACCACCTCCACCAAGACTGGAGAGGCGGTCAAGAACATCCAG
GCCACCCTGGGGGCCTCCTCACAGCGCATCAGCCAGAACTCAGAGAGCATGCACGACCTG
GTACTCCAGGTCATGGGCTTGCAGCTGCAGCTGGATAACATCTCGTCCTTCCTGGATGAC
CACGAAGAGAACATGCATGATCTTCAGTACCATACCCACTACGCCCAGAACCGCACTGTG
GAGAGGTTTGAGTCTCTGGAAGGACGCATGGCTTCTCACGAGATTGAAATTGGCACCATC
TTCACCAACATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGATGAC
GTGCGGCTCTCCTGCACGCTGGGCTTCCACACCCATGCCGAGGAGCTCTACTACCTGAAC
AAGTCTGTCTCCATCATGCTGGGCACCACAGACCTGCTCCGGGAGCGCTTCAGCCTGCTC
AGTGCCCGGCTGGACCTCAACGTCCGGAACCTCTCCATGATCGTGGAGGAGATGAAGGCA
GTGGACACACAGCATGGAGAAATCCTTCGCAATGTCACCATCCTACGAGGTGCCCCCGGC
CCTCCAGGACCAAGAGGATTCAAAGGAGATATGGGCGTGAAAGGGCCTGTTGGCGGCAGA
GGCCCGAAAGGAGACCCCGGCAGCTTGGGCCCCCTGGGACCCCAGGGTCCTCAGGGGCAA
CCTGGAGAGGCCGGGCCTGTGGGAGAAAGGGGCCCTGTTGGCCCTCGAGGGTTCCCAGGC
CTCAAAGGCTCAAAGGGCAGCTTTGGAACTGGAGGGCCGAGAGGACAGCCAGGCCCAAAA
GGGGACATAGGGCCCCCAGGGCCAGAAGGGCCCCCGGGGTCTCCAGGGCCCTCAGGGCCT
CAGGGAAAACCGGGAATTGCAGGGAAGACAGGGTCACCAGGCCAGCGGGGGGCCATGGGG
CCTAAGGGTGAACCAGGGATCCAGGGTCCCCCTGGTCTCCCGGGGCCTCCAGGTCCACCA
GGAAGCCAGAGCTTCTAC

ORF Protein

Cloned ORF protein sequence for pF1KE1097 Download

>KIEE1097  606 aa
MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL
FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH
EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ
VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK
TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL
VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI
FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL
SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRGAPGPPGPRGFKGDMGVKGPVGGR
GPKGDPGSLGPLGPQGPQGQPGEAGPVGERGPVGPRGFPGLKGSKGSFGTGGPRGQPGPK
GDIGPPGPEGPPGSPGPSGPQGKPGIAGKTGSPGQRGAMGPKGEPGIQGPPGLPGPPGPP
GSQSFY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE1097 Download

>pF1KE1097  4931 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAAGTGAGG
TCGGCCGGCGGCGATGGAGATGCCTTGTGCGTTACAGAAGAGGACCTGGCGGGTGACGAC
GAGGACATGCCGACCTTCCCATGCACCCAGAAGGGCCGGCCAGGGCCCCGCTGCAGCCGC
TGCCAGAAGAACCTATCTTTGCACACATCGGTGCGGATTCTTTACCTCTTCCTGGCCCTG
CTCCTGGTGGCCGTGGCTGTGTTGGCCTCTCTGGTTTTCAGAAAAGTGGACTCTCTCTCC
GAAGACATCTCCTTGACCCAGTCTATTTATGACAAGAAGCTTGTGTTAATGCAGAAAAAT
CTCCAGGGCCTGGATCCGAAAGCCCTGAACAACTGCTCTTTCTGCCATGAAGCTGGGCAG
CTGGGGCCAGAGATCCGAAAACTGCAGGAGGAGCTGGAGGGAATTCAGAAGCTGCTTCTG
GCCCAGGAGGTGCAGCTGGACCAGACCTTACAGGCCCAGGAGGTGCTCTCCACCACCAGC
AGACAAATCTCCCAGGAGATGGGCAGTTGCTCCTTCTCCATCCACCAGGTTAACCAGTCT
CTGGGGCTCTTCCTGGCCCAGGTGAGAGGCTGGCAGGCCACCACAGCTGGCCTGGACCTC
TCTCTGAAGGACCTCACCCAGGAGTGCTACGATGTCAAGGCTGCAGTGCACCAGATCAAC
TTCACCGTGGGGCAGACTTCCGAGTGGATCCACGGGATCCAGCGGAAGACAGACGAGGAG
ACCCTGACCCTCCAGAAGATTGTCACCGACTGGCAGAACTACACACGGCTCTTCAGCGGC
CTGCGCACCACCTCCACCAAGACTGGAGAGGCGGTCAAGAACATCCAGGCCACCCTGGGG
GCCTCCTCACAGCGCATCAGCCAGAACTCAGAGAGCATGCACGACCTGGTACTCCAGGTC
ATGGGCTTGCAGCTGCAGCTGGATAACATCTCGTCCTTCCTGGATGACCACGAAGAGAAC
ATGCATGATCTTCAGTACCATACCCACTACGCCCAGAACCGCACTGTGGAGAGGTTTGAG
TCTCTGGAAGGACGCATGGCTTCTCACGAGATTGAAATTGGCACCATCTTCACCAACATC
AATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGATGACGTGCGGCTCTCC
TGCACGCTGGGCTTCCACACCCATGCCGAGGAGCTCTACTACCTGAACAAGTCTGTCTCC
ATCATGCTGGGCACCACAGACCTGCTCCGGGAGCGCTTCAGCCTGCTCAGTGCCCGGCTG
GACCTCAACGTCCGGAACCTCTCCATGATCGTGGAGGAGATGAAGGCAGTGGACACACAG
CATGGAGAAATCCTTCGCAATGTCACCATCCTACGAGGTGCCCCCGGCCCTCCAGGACCA
AGAGGATTCAAAGGAGATATGGGCGTGAAAGGGCCTGTTGGCGGCAGAGGCCCGAAAGGA
GACCCCGGCAGCTTGGGCCCCCTGGGACCCCAGGGTCCTCAGGGGCAACCTGGAGAGGCC
GGGCCTGTGGGAGAAAGGGGCCCTGTTGGCCCTCGAGGGTTCCCAGGCCTCAAAGGCTCA
AAGGGCAGCTTTGGAACTGGAGGGCCGAGAGGACAGCCAGGCCCAAAAGGGGACATAGGG
CCCCCAGGGCCAGAAGGGCCCCCGGGGTCTCCAGGGCCCTCAGGGCCTCAGGGAAAACCG
GGAATTGCAGGGAAGACAGGGTCACCAGGCCAGCGGGGGGCCATGGGGCCTAAGGGTGAA
CCAGGGATCCAGGGTCCCCCTGGTCTCCCGGGGCCTCCAGGTCCACCAGGAAGCCAGAGC
TTCTACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT