OR1B1 ORF clone FXC11336

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Flexi ORF Clone FXC11336

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Clone info.

Species

human

Clone Name

pF1KE0882 Sequence (with vector) Restriction Map

Product ID

FXC11336

HaloTag Clone PID

FHC11336

ORF Sequence

DNA sequence (954 bp)
Protein sequence (318 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529298]

Gene

KIEE0882

Symbol

OR1B1

Alias : OR9-26, OR9-B

Description

olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)

Original Clone ID

cp01282

Features of the cloned ORF sequence

Description

Length: 954 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 318 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11024.1 1.4e-39 46.7 OR1E1 CCDS35132.1 4.2e-39 47.1 OR1K1 CCDS10496.1 6.5e-39 45.6 OR1F1 CCDS35127.2 1.4e-38 43.4 OR1L1 CCDS11026.1 3.9e-38 45.0 OR1E2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000725 182 198 PR00245 Olfactory receptor IPR000725 242 251 PR00245 Olfactory receptor IPR000276 278 304 PR00237 GPCR IPR000725 289 300 PR00245 Olfactory receptor HMMPfam IPR000276 43 296 PF00001 GPCR ProfileScan IPR017452 43 296 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 29 LFFLFLAIYLTTILGNVTLVLLI 51 PRIMARY 23 2 100 LAQFFFFYAFGVTDTLVIAVMAL 122 PRIMARY 23 3 147 LALSWVVSILHTMLRVGLVLPLC 169 PRIMARY 23 4 214 LGPCALIVLSYVRIGAAILRLPS 236 SECONDARY 23 5 246 TCGSHLTMVGFLYGTIICVYFQ 267 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 45.6 95.9 NP_036492 312 603232 45.6 95.9 XP_011520808 322 603232 45.6 95.9 NP_002539 312 164342 43.1 96.2 XP_011514321 317 608497 42.1 94.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0882 Download

>KIEE0882  954 bp
ATGATGAGCTTTGCCCCTAATGCTTCACACTCTCCGGTTTTTTTGCTCCTTGGGTTCTCG
AGAGCTAACATCTCCTACACTCTCCTCTTCTTCCTGTTCCTGGCTATTTACCTGACCACC
ATACTGGGGAATGTGACACTGGTGCTGCTCATCTCCTGGGACTCCAGACTGCACTCACCC
ATGTATTATCTGCTTCGTGGCCTCTCTGTGATAGACATGGGGCTATCCACAGTTACACTG
CCCCAGTTGCTGGCCCATTTGGTCTCTCATTACCCAACCATTCCTGCTGCCCGCTGCTTG
GCTCAGTTCTTTTTCTTCTATGCATTTGGGGTTACAGATACACTTGTCATTGCTGTCATG
GCTCTGGATCGCTATGTGGCCATCTGTGACCCCCTGCACTATGCTTTGGTAATGAATCAC
CAACGGTGTGCCTGCTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTG
CGTGTGGGACTCGTCCTGCCTCTTTGCTGGACTGGGGATGCTGGGGGCAACGTTAACCTT
CCTCACTTCTTTTGTGACCACCGGCCACTTCTGCGAGCCTCTTGTTCTGACATACATTCT
AATGAGCTGGCCATATTCTTTGAGGGTGGCTTCCTTATGCTGGGCCCCTGTGCCCTCATT
GTACTCTCTTATGTCCGAATTGGGGCCGCTATTCTACGTTTGCCTTCAGCTGCTGGTCGC
CGCCGAGCAGTCTCCACCTGTGGATCCCACCTCACCATGGTTGGTTTCCTCTACGGCACC
ATCATTTGTGTCTACTTCCAGCCTCCCTTCCAGAACTCTCAGTATCAGGACATGGTGGCT
TCAGTAATGTATACTGCCATTACACCTTTGGCCAACCCATTTGTGTATAGCCTCCACAAT
AAGGATGTCAAGGGTGCACTCTGCAGGCTGCTTGAATGGGTGAAGGTAGACCCC

ORF Protein

Cloned ORF protein sequence for pF1KE0882 Download

>KIEE0882  318 aa
MMSFAPNASHSPVFLLLGFSRANISYTLLFFLFLAIYLTTILGNVTLVLLISWDSRLHSP
MYYLLRGLSVIDMGLSTVTLPQLLAHLVSHYPTIPAARCLAQFFFFYAFGVTDTLVIAVM
ALDRYVAICDPLHYALVMNHQRCACLLALSWVVSILHTMLRVGLVLPLCWTGDAGGNVNL
PHFFCDHRPLLRASCSDIHSNELAIFFEGGFLMLGPCALIVLSYVRIGAAILRLPSAAGR
RRAVSTCGSHLTMVGFLYGTIICVYFQPPFQNSQYQDMVASVMYTAITPLANPFVYSLHN
KDVKGALCRLLEWVKVDP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0882 Download

>pF1KE0882  4067 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGAGCTTT
GCCCCTAATGCTTCACACTCTCCGGTTTTTTTGCTCCTTGGGTTCTCGAGAGCTAACATC
TCCTACACTCTCCTCTTCTTCCTGTTCCTGGCTATTTACCTGACCACCATACTGGGGAAT
GTGACACTGGTGCTGCTCATCTCCTGGGACTCCAGACTGCACTCACCCATGTATTATCTG
CTTCGTGGCCTCTCTGTGATAGACATGGGGCTATCCACAGTTACACTGCCCCAGTTGCTG
GCCCATTTGGTCTCTCATTACCCAACCATTCCTGCTGCCCGCTGCTTGGCTCAGTTCTTT
TTCTTCTATGCATTTGGGGTTACAGATACACTTGTCATTGCTGTCATGGCTCTGGATCGC
TATGTGGCCATCTGTGACCCCCTGCACTATGCTTTGGTAATGAATCACCAACGGTGTGCC
TGCTTACTAGCCTTGAGCTGGGTGGTGTCCATACTGCACACCATGTTGCGTGTGGGACTC
GTCCTGCCTCTTTGCTGGACTGGGGATGCTGGGGGCAACGTTAACCTTCCTCACTTCTTT
TGTGACCACCGGCCACTTCTGCGAGCCTCTTGTTCTGACATACATTCTAATGAGCTGGCC
ATATTCTTTGAGGGTGGCTTCCTTATGCTGGGCCCCTGTGCCCTCATTGTACTCTCTTAT
GTCCGAATTGGGGCCGCTATTCTACGTTTGCCTTCAGCTGCTGGTCGCCGCCGAGCAGTC
TCCACCTGTGGATCCCACCTCACCATGGTTGGTTTCCTCTACGGCACCATCATTTGTGTC
TACTTCCAGCCTCCCTTCCAGAACTCTCAGTATCAGGACATGGTGGCTTCAGTAATGTAT
ACTGCCATTACACCTTTGGCCAACCCATTTGTGTATAGCCTCCACAATAAGGATGTCAAG
GGTGCACTCTGCAGGCTGCTTGAATGGGTGAAGGTAGACCCCGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT