OR5P1P ORF clone FXC11296

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Flexi ORF Clone FXC11296

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Clone info.

Species

human

Clone Name

pF1KE0831 Sequence (with vector) Restriction Map

Product ID

FXC11296

HaloTag Clone PID

FHC11296

ORF Sequence

DNA sequence (756 bp)
Protein sequence (252 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529258]

Gene

KIEE0831

Symbol

OR5P1P

Alias : PJCG1

Description

olfactory receptor, family 5, subfamily P, member 1 pseudogene

Original Clone ID

cp01231

Features of the cloned ORF sequence

Description

Length: 756 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 252 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7783.1 1.9e-61 73.1 OR5P3 CCDS7782.1 7.9e-49 60.6 OR5P2 CCDS31525.1 1.7e-39 49.4 OR5T1 CCDS31534.1 9.6e-39 50.6 OR5AP2 CCDS31520.1 3.7e-38 47.8 OR8J3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 1 13 PR00237 GPCR IPR000276 46 68 PR00237 GPCR IPR000725 71 83 PR00245 Olfactory receptor IPR000725 118 134 PR00245 Olfactory receptor IPR000725 178 187 PR00245 Olfactory receptor IPR000276 214 240 PR00237 GPCR IPR000725 225 236 PR00245 Olfactory receptor HMMPfam IPR000276 1 232 PF00001 GPCR ProfileScan IPR017452 1 232 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 4 FLSHLAFVDIGLATVVTPIMLMG 26 PRIMARY 23 2 54 CFLLATMAYDRYVAICSPLVNST 76 SECONDARY 23 3 84 ILLVGVCYLGGCVNASTFTSCLL 106 PRIMARY 23 4 144 SSGSIIVVTVFAIAISYIYILIT 166 PRIMARY 23 5 189 AVTLYYGTITFIYVMPKSSYSTS 211 SECONDARY 23 6 214 RLISLSYTVVIPILNPFIYSLR 235 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 46.5 97.2 NP_003688 314 608492 46.2 98.8 NP_835462 317 608493 44.0 99.2 XP_011520809 312 603232 45.0 99.2 NP_036492 312 603232 45.0 99.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0831 Download

>KIEE0831  756 bp
ATGTACCTGTTCCTCAGCCACTTGGCTTTTGTGGACATAGGGCTTGCCACAGTAGTCACA
CCTATAATGCTTATGGGATTCCTAAGACGTGGAACAGCCCTCCCTGTCACTAGCTGTGAA
GCCCAGCTCTGTTCTGTAGTCATGTTTGGGACGTCTGAATGCTTCCTACTGGCGACCATG
GCCTATGATCGCTATGTGGCCATCTGCTCACCCCTGGTGAACTCCACCCACTTGTCCCCC
ATAATCTGCATACTCTTAGTGGGGGTTTGCTACCTGGGTGGATGTGTGAATGCCTCAACA
TTTACTAGTTGTTTATTGAGTCTGTCTTTCTGTGGACCAAATCAGATAGATCATTTTTTC
TGTGATTTCTCTCCTTTGTTGAAACTTTCCTGCTCAAATATCTCCATTCCTGAAATTATC
CCTTCCATCTCTTCTGGATCTATCATTGTGGTCACAGTATTTGCCATAGCCATCTCCTAC
ATCTACATCCTCATCACCATCCTGAAGATGCGCTCCGCCGAGGGGCGCCACAAGGCCTTC
TCCACCTGTACCTCCCACCTCGCTGCGGTTACTCTCTACTATGGAACGATTACCTTCATT
TATGTGATGCCCAAATCCAGTTACTCAACTAGCCAGAACAGATTGATATCGCTGTCCTAC
ACAGTGGTAATCCCCATACTGAACCCCTTTATCTATAGTCTGAGGAACAGAGATGTAAAG
GAGGCACTAAGAAAGGCAACTGTCAGAATATATTCT

ORF Protein

Cloned ORF protein sequence for pF1KE0831 Download

>KIEE0831  252 aa
MYLFLSHLAFVDIGLATVVTPIMLMGFLRRGTALPVTSCEAQLCSVVMFGTSECFLLATM
AYDRYVAICSPLVNSTHLSPIICILLVGVCYLGGCVNASTFTSCLLSLSFCGPNQIDHFF
CDFSPLLKLSCSNISIPEIIPSISSGSIIVVTVFAIAISYIYILITILKMRSAEGRHKAF
STCTSHLAAVTLYYGTITFIYVMPKSSYSTSQNRLISLSYTVVIPILNPFIYSLRNRDVK
EALRKATVRIYS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0831 Download

>pF1KE0831  3869 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACCTGTTC
CTCAGCCACTTGGCTTTTGTGGACATAGGGCTTGCCACAGTAGTCACACCTATAATGCTT
ATGGGATTCCTAAGACGTGGAACAGCCCTCCCTGTCACTAGCTGTGAAGCCCAGCTCTGT
TCTGTAGTCATGTTTGGGACGTCTGAATGCTTCCTACTGGCGACCATGGCCTATGATCGC
TATGTGGCCATCTGCTCACCCCTGGTGAACTCCACCCACTTGTCCCCCATAATCTGCATA
CTCTTAGTGGGGGTTTGCTACCTGGGTGGATGTGTGAATGCCTCAACATTTACTAGTTGT
TTATTGAGTCTGTCTTTCTGTGGACCAAATCAGATAGATCATTTTTTCTGTGATTTCTCT
CCTTTGTTGAAACTTTCCTGCTCAAATATCTCCATTCCTGAAATTATCCCTTCCATCTCT
TCTGGATCTATCATTGTGGTCACAGTATTTGCCATAGCCATCTCCTACATCTACATCCTC
ATCACCATCCTGAAGATGCGCTCCGCCGAGGGGCGCCACAAGGCCTTCTCCACCTGTACC
TCCCACCTCGCTGCGGTTACTCTCTACTATGGAACGATTACCTTCATTTATGTGATGCCC
AAATCCAGTTACTCAACTAGCCAGAACAGATTGATATCGCTGTCCTACACAGTGGTAATC
CCCATACTGAACCCCTTTATCTATAGTCTGAGGAACAGAGATGTAAAGGAGGCACTAAGA
AAGGCAACTGTCAGAATATATTCTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT