OR5E1P ORF clone FXC11289

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Flexi ORF Clone FXC11289

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Clone info.

Species

human

Clone Name

pF1KE0820 Sequence (with vector) Restriction Map

Product ID

FXC11289

HaloTag Clone PID

FHC11289

ORF Sequence

DNA sequence (582 bp)
Protein sequence (194 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529251]

Gene

KIEE0820

Symbol

OR5E1P

Alias : HSTPCR24, OR5E1, TPCR24

Description

olfactory receptor, family 5, subfamily E, member 1 pseudogene

Original Clone ID

cp01220

Features of the cloned ORF sequence

Description

Length: 582 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 194 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31520.1 2.6e-38 53.2 OR8J3 CCDS31529.1 2.6e-38 53.7 OR8J1 CCDS31516.1 5.6e-38 52.1 OR5AS1 CCDS41647.1 8.4e-38 52.6 OR8U1 CCDS53630.1 1.4e-36 51.6 OR5M10 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 12 24 PR00245 Olfactory receptor IPR000725 59 75 PR00245 Olfactory receptor IPR000725 119 128 PR00245 Olfactory receptor IPR000725 167 178 PR00245 Olfactory receptor HMMPfam IPR000276 3 174 PF00001 GPCR ProfileScan IPR017452 1 174 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 AICNPLIYTAIMTQRVCRELVIG 30 SECONDARY 23 2 87 AVNLTGSLLTIFISYICILFSII 109 PRIMARY 23 3 124 RASHLTVVTIFYGTLFFMYL 143 SECONDARY 20 4 156 KVVSVFYSLVIPMLNPLIYR 175 SECONDARY 20
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003688 314 608492 50.5 99.0 NP_006628 314 608496 47.9 99.0 NP_001004729 311 615702 48.4 99.0 NP_003691 308 608494 46.3 96.9 XP_011514322 317 608497 46.6 97.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0820 Download

>KIEE0820  582 bp
ATGCCCTACGACCGCTACGTGGCCATCTGCAACCCCCTGATTTACACAGCTATTATGACG
CAGCGGGTCTGCAGGGAGTTAGTGATAGGGGTCTATACCTATGGCTTCCGAAACTCTGTG
ATACAGACAGCTCTGACGTTTCAGCTGTCTTTCTGCAACTCCGACGTCATCCACCACTTC
TACTGTGCTGACCCCCCTCTCCTGGCCCTCTCCTGCTCTGACACCCACAACAAAGAAAAG
CAGCTCATGATCTTCTCTGCAGTAAATCTCACTGGGTCCCTCCTTACCATCTTCATCTCC
TACATTTGCATCCTCTTTTCCATTATAAAAATCCAGTCTTCCGAGGGCAAGTGCAGAGCA
TTTTCCACCCGTGCCTCCCACCTCACTGTCGTCACCATCTTTTATGGCACACTATTTTTC
ATGTACCTGCAGCAACCAAAAGCGGGGAATTCATGGAAGCCAAACAAAGTAGTCTCTGTG
TTTTATAGTCTTGTAATTCCCATGCTTAACCCTCTTATCTATCGCCTGAGAAACACAGAA
GTAAAGGATGCCCTGAAAAAAATGCTAGAGGGCAAAGAGTTA

ORF Protein

Cloned ORF protein sequence for pF1KE0820 Download

>KIEE0820  194 aa
MPYDRYVAICNPLIYTAIMTQRVCRELVIGVYTYGFRNSVIQTALTFQLSFCNSDVIHHF
YCADPPLLALSCSDTHNKEKQLMIFSAVNLTGSLLTIFISYICILFSIIKIQSSEGKCRA
FSTRASHLTVVTIFYGTLFFMYLQQPKAGNSWKPNKVVSVFYSLVIPMLNPLIYRLRNTE
VKDALKKMLEGKEL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0820 Download

>pF1KE0820  3695 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCCTACGAC
CGCTACGTGGCCATCTGCAACCCCCTGATTTACACAGCTATTATGACGCAGCGGGTCTGC
AGGGAGTTAGTGATAGGGGTCTATACCTATGGCTTCCGAAACTCTGTGATACAGACAGCT
CTGACGTTTCAGCTGTCTTTCTGCAACTCCGACGTCATCCACCACTTCTACTGTGCTGAC
CCCCCTCTCCTGGCCCTCTCCTGCTCTGACACCCACAACAAAGAAAAGCAGCTCATGATC
TTCTCTGCAGTAAATCTCACTGGGTCCCTCCTTACCATCTTCATCTCCTACATTTGCATC
CTCTTTTCCATTATAAAAATCCAGTCTTCCGAGGGCAAGTGCAGAGCATTTTCCACCCGT
GCCTCCCACCTCACTGTCGTCACCATCTTTTATGGCACACTATTTTTCATGTACCTGCAG
CAACCAAAAGCGGGGAATTCATGGAAGCCAAACAAAGTAGTCTCTGTGTTTTATAGTCTT
GTAATTCCCATGCTTAACCCTCTTATCTATCGCCTGAGAAACACAGAAGTAAAGGATGCC
CTGAAAAAAATGCTAGAGGGCAAAGAGTTAGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT