OR5BB1P ORF clone FXC03538

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Flexi ORF Clone FXC03538

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Clone info.

Species

human

Clone Name

pF1KE0829 Sequence (with vector) Restriction Map

Product ID

FXC03538

HaloTag Clone PID

FHC03538

ORF Sequence

DNA sequence (828 bp)
Protein sequence (276 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529231]

Gene

KIEE0829

Symbol

OR5BB1P

Description

olfactory receptor, family 5, subfamily BB, member 1 pseudogene

Original Clone ID

cp01229

Features of the cloned ORF sequence

Description

Length: 828 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 276 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31561.1 2.2e-43 55.6 OR5A1 CCDS31560.1 1.1e-42 52.8 OR5A2 CCDS31559.1 2.1e-39 49.6 OR5AN1 CCDS31698.1 3.5e-36 47.3 OR8D4 CCDS41647.1 8.5e-36 47.7 OR8U1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 33 57 PR00237 GPCR IPR000276 66 87 PR00237 GPCR IPR000725 99 110 PR00245 Olfactory receptor IPR000276 111 133 PR00237 GPCR IPR000725 136 148 PR00245 Olfactory receptor IPR000725 183 199 PR00245 Olfactory receptor IPR000725 243 252 PR00245 Olfactory receptor HMMPfam IPR000276 49 261 PF00001 GPCR ProfileScan IPR017452 48 276 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 LFPVFLVIYLVTLIWNMGLIILI 56 PRIMARY 23 2 102 LACATQYFLGAWMSLAECCLLVI 124 PRIMARY 23 3 148 CWKMVAGVCGGGFLSSLVHTVPC 170 SECONDARY 23 4 207 FLEAIFVGLGSLLVILLSYGFIV 229 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004729 311 615702 49.6 97.1 NP_003688 314 608492 48.5 95.7 NP_006628 314 608496 45.4 97.1 XP_011520808 322 603232 44.7 98.9 XP_011520809 312 603232 44.8 96.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0829 Download

>KIEE0829  828 bp
ATGGCACCAAGCAGATCCATGGAAGTGAGTGGGAACCACACCTCTGTGGCCATGTTTGTT
CTCCTAGGACTCTCAGATGAAAAAGAGCTGCAGCTCATCCTCTTTCCAGTCTTCCTGGTG
ATCTACCTTGTGACCCTGATTTGGAACATGGGTCTTATCATCCTCATCAGAATAGACTCT
CACCTGAACACACCCATGTACTTTTTTCTCAGTTTCCTCTCATTTACAGACATCTGCTAT
TCTTCTACCATCAGCCCAAGGATGCTTTCAGACTTCTTAAAAGATAAGAAGACAATTTCC
TTCCTTGCCTGTGCCACTCAGTATTTTCTTGGGGCCTGGATGAGTCTGGCTGAGTGCTGC
CTCTTGGTCATCATGGCCTGTGACAGATATGTGGCCATTGGCAGCCCCCTGCAGTACTCA
GCAATCATGGTCCCTAGTATCTGTTGGAAGATGGTAGCTGGAGTCTGTGGGGGTGGATTC
CTTAGTAGCTTAGTTCATACAGTCCCTTGCTTTAATCTCTACTACTGTGGGCCAAATATC
ATTCAACATTTCTTCTGTAACACACTTCAGATTATTTCCTTGTCTTGCTCCAACCCCTTT
ATCAGCCAAATGATTCTTTTTCTGGAAGCTATTTTTGTTGGGTTGGGCTCTTTGCTTGTT
ATCCTTTTGTCTTATGGTTTCATTGTAGCTTCCATACTGAAAATATCATCAACCAAATGT
TGTGCCAAGGCCTTCAATACCTGTGCCTCCCACCTGGCAGCTGTGGCTCTCTTCTATGGC
ACAGCCCTTTCTGTGTACATGCATCCTAGCTCTAGCCACTCCATGAAG

ORF Protein

Cloned ORF protein sequence for pF1KE0829 Download

>KIEE0829  276 aa
MAPSRSMEVSGNHTSVAMFVLLGLSDEKELQLILFPVFLVIYLVTLIWNMGLIILIRIDS
HLNTPMYFFLSFLSFTDICYSSTISPRMLSDFLKDKKTISFLACATQYFLGAWMSLAECC
LLVIMACDRYVAIGSPLQYSAIMVPSICWKMVAGVCGGGFLSSLVHTVPCFNLYYCGPNI
IQHFFCNTLQIISLSCSNPFISQMILFLEAIFVGLGSLLVILLSYGFIVASILKISSTKC
CAKAFNTCASHLAAVALFYGTALSVYMHPSSSHSMK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0829 Download

>pF1KE0829  3941 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCACCAAGC
AGATCCATGGAAGTGAGTGGGAACCACACCTCTGTGGCCATGTTTGTTCTCCTAGGACTC
TCAGATGAAAAAGAGCTGCAGCTCATCCTCTTTCCAGTCTTCCTGGTGATCTACCTTGTG
ACCCTGATTTGGAACATGGGTCTTATCATCCTCATCAGAATAGACTCTCACCTGAACACA
CCCATGTACTTTTTTCTCAGTTTCCTCTCATTTACAGACATCTGCTATTCTTCTACCATC
AGCCCAAGGATGCTTTCAGACTTCTTAAAAGATAAGAAGACAATTTCCTTCCTTGCCTGT
GCCACTCAGTATTTTCTTGGGGCCTGGATGAGTCTGGCTGAGTGCTGCCTCTTGGTCATC
ATGGCCTGTGACAGATATGTGGCCATTGGCAGCCCCCTGCAGTACTCAGCAATCATGGTC
CCTAGTATCTGTTGGAAGATGGTAGCTGGAGTCTGTGGGGGTGGATTCCTTAGTAGCTTA
GTTCATACAGTCCCTTGCTTTAATCTCTACTACTGTGGGCCAAATATCATTCAACATTTC
TTCTGTAACACACTTCAGATTATTTCCTTGTCTTGCTCCAACCCCTTTATCAGCCAAATG
ATTCTTTTTCTGGAAGCTATTTTTGTTGGGTTGGGCTCTTTGCTTGTTATCCTTTTGTCT
TATGGTTTCATTGTAGCTTCCATACTGAAAATATCATCAACCAAATGTTGTGCCAAGGCC
TTCAATACCTGTGCCTCCCACCTGGCAGCTGTGGCTCTCTTCTATGGCACAGCCCTTTCT
GTGTACATGCATCCTAGCTCTAGCCACTCCATGAAGGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT