OR5BB1P ORF clone FHC03538

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Halotag ORF Clone FHC03538

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Clone info.

Species

human

Clone Name

pFN21AE0829 Sequence (with vector) Restriction Map

Product ID

FHC03538

Flexi Clone PID

FXC03538

ORF Sequence

DNA sequence (828 bp)
Protein sequence (276 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529231]

Gene

KIEE0829

Symbol

OR5BB1P

Description

olfactory receptor, family 5, subfamily BB, member 1 pseudogene

Original Clone ID

cp01229

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 828 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 276 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31561.1 2.2e-43 55.6 OR5A1 CCDS31560.1 1.1e-42 52.8 OR5A2 CCDS31559.1 2.1e-39 49.6 OR5AN1 CCDS31698.1 3.5e-36 47.3 OR8D4 CCDS41647.1 8.5e-36 47.7 OR8U1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 33 57 PR00237 GPCR IPR000276 66 87 PR00237 GPCR IPR000725 99 110 PR00245 Olfactory receptor IPR000276 111 133 PR00237 GPCR IPR000725 136 148 PR00245 Olfactory receptor IPR000725 183 199 PR00245 Olfactory receptor IPR000725 243 252 PR00245 Olfactory receptor HMMPfam IPR000276 49 261 PF00001 GPCR ProfileScan IPR017452 48 276 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 LFPVFLVIYLVTLIWNMGLIILI 56 PRIMARY 23 2 102 LACATQYFLGAWMSLAECCLLVI 124 PRIMARY 23 3 148 CWKMVAGVCGGGFLSSLVHTVPC 170 SECONDARY 23 4 207 FLEAIFVGLGSLLVILLSYGFIV 229 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004729 311 615702 49.6 97.1 NP_003688 314 608492 48.5 95.7 NP_006628 314 608496 45.4 97.1 XP_011520808 322 603232 44.7 98.9 XP_011520809 312 603232 44.8 96.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0829 Download

>KIEE0829  828 bp
ATGGCACCAAGCAGATCCATGGAAGTGAGTGGGAACCACACCTCTGTGGCCATGTTTGTT
CTCCTAGGACTCTCAGATGAAAAAGAGCTGCAGCTCATCCTCTTTCCAGTCTTCCTGGTG
ATCTACCTTGTGACCCTGATTTGGAACATGGGTCTTATCATCCTCATCAGAATAGACTCT
CACCTGAACACACCCATGTACTTTTTTCTCAGTTTCCTCTCATTTACAGACATCTGCTAT
TCTTCTACCATCAGCCCAAGGATGCTTTCAGACTTCTTAAAAGATAAGAAGACAATTTCC
TTCCTTGCCTGTGCCACTCAGTATTTTCTTGGGGCCTGGATGAGTCTGGCTGAGTGCTGC
CTCTTGGTCATCATGGCCTGTGACAGATATGTGGCCATTGGCAGCCCCCTGCAGTACTCA
GCAATCATGGTCCCTAGTATCTGTTGGAAGATGGTAGCTGGAGTCTGTGGGGGTGGATTC
CTTAGTAGCTTAGTTCATACAGTCCCTTGCTTTAATCTCTACTACTGTGGGCCAAATATC
ATTCAACATTTCTTCTGTAACACACTTCAGATTATTTCCTTGTCTTGCTCCAACCCCTTT
ATCAGCCAAATGATTCTTTTTCTGGAAGCTATTTTTGTTGGGTTGGGCTCTTTGCTTGTT
ATCCTTTTGTCTTATGGTTTCATTGTAGCTTCCATACTGAAAATATCATCAACCAAATGT
TGTGCCAAGGCCTTCAATACCTGTGCCTCCCACCTGGCAGCTGTGGCTCTCTTCTATGGC
ACAGCCCTTTCTGTGTACATGCATCCTAGCTCTAGCCACTCCATGAAG

ORF Protein

Cloned ORF protein sequence for pFN21AE0829 Download

>KIEE0829  276 aa
MAPSRSMEVSGNHTSVAMFVLLGLSDEKELQLILFPVFLVIYLVTLIWNMGLIILIRIDS
HLNTPMYFFLSFLSFTDICYSSTISPRMLSDFLKDKKTISFLACATQYFLGAWMSLAECC
LLVIMACDRYVAIGSPLQYSAIMVPSICWKMVAGVCGGGFLSSLVHTVPCFNLYYCGPNI
IQHFFCNTLQIISLSCSNPFISQMILFLEAIFVGLGSLLVILLSYGFIVASILKISSTKC
CAKAFNTCASHLAAVALFYGTALSVYMHPSSSHSMK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0829 Download

>pFN21AE0829  5533 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCACCAAGCAGATCCATGGAAGTGAGTGGGAA
CCACACCTCTGTGGCCATGTTTGTTCTCCTAGGACTCTCAGATGAAAAAGAGCTGCAGCT
CATCCTCTTTCCAGTCTTCCTGGTGATCTACCTTGTGACCCTGATTTGGAACATGGGTCT
TATCATCCTCATCAGAATAGACTCTCACCTGAACACACCCATGTACTTTTTTCTCAGTTT
CCTCTCATTTACAGACATCTGCTATTCTTCTACCATCAGCCCAAGGATGCTTTCAGACTT
CTTAAAAGATAAGAAGACAATTTCCTTCCTTGCCTGTGCCACTCAGTATTTTCTTGGGGC
CTGGATGAGTCTGGCTGAGTGCTGCCTCTTGGTCATCATGGCCTGTGACAGATATGTGGC
CATTGGCAGCCCCCTGCAGTACTCAGCAATCATGGTCCCTAGTATCTGTTGGAAGATGGT
AGCTGGAGTCTGTGGGGGTGGATTCCTTAGTAGCTTAGTTCATACAGTCCCTTGCTTTAA
TCTCTACTACTGTGGGCCAAATATCATTCAACATTTCTTCTGTAACACACTTCAGATTAT
TTCCTTGTCTTGCTCCAACCCCTTTATCAGCCAAATGATTCTTTTTCTGGAAGCTATTTT
TGTTGGGTTGGGCTCTTTGCTTGTTATCCTTTTGTCTTATGGTTTCATTGTAGCTTCCAT
ACTGAAAATATCATCAACCAAATGTTGTGCCAAGGCCTTCAATACCTGTGCCTCCCACCT
GGCAGCTGTGGCTCTCTTCTATGGCACAGCCCTTTCTGTGTACATGCATCCTAGCTCTAG
CCACTCCATGAAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT