OR8B1P ORF clone FXC03537

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Flexi ORF Clone FXC03537

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Clone info.

Species

human

Clone Name

pF1KE0828 Sequence (with vector) Restriction Map

Product ID

FXC03537

HaloTag Clone PID

FHC03537

ORF Sequence

DNA sequence (570 bp)
Protein sequence (190 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529230]

Gene

KIEE0828

Symbol

OR8B1P

Alias : OR11-561, OR8B11P

Description

olfactory receptor, family 8, subfamily B, member 1 pseudogene

Original Clone ID

cp01228

Features of the cloned ORF sequence

Description

Length: 570 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 190 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31709.1 1.4e-58 75.8 OR8B3 CCDS31708.1 6.2e-58 75.3 OR8B2 CCDS8446.1 4.4e-57 73.2 OR8B8 CCDS31711.1 5.6e-53 66.8 OR8B12 CCDS31710.1 7.7e-53 69.2 OR8B4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 9 21 PR00245 Olfactory receptor IPR000725 56 72 PR00245 Olfactory receptor IPR000725 116 125 PR00245 Olfactory receptor IPR000725 163 174 PR00245 Olfactory receptor HMMPfam IPR000276 4 170 PF00001 GPCR ProfileScan IPR017452 1 170 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 IAVAICNPLLYHIAMSPTVCSSL 24 PRIMARY 23 2 88 IVPTVTIFISYGFILSSILHISS 110 PRIMARY 23 3 118 FSTCSSHIIAVSLFFGSGAFMY 139 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004729 311 615702 50.3 97.4 NP_003688 314 608492 45.4 97.4 NP_006628 314 608496 49.5 97.4 NP_036492 312 603232 42.9 95.8 XP_011520809 312 603232 42.9 95.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0828 Download

>KIEE0828  570 bp
ATGATCGCTGTGGCCATCTGTAACCCACTTCTGTATCACATTGCCATGTCTCCTACAGTG
TGCTCCAGCCTTATGTTTGGTTCCTATTTGATGGCCTTTTCTGGTGCCATGGCCCACACT
GGATGCATGCTGAGACTGACTTTCTGTGATGCGAACACCATCGATCACTACTTCTGTGAC
ATCCTCCCTCTGCTCCAGCTCTCCTGCACCAGCACCTACATCAATGAGCTGGTGGTTTTC
ACTGTGGTTGGCATCAACATCATTGTGCCCACTGTTACCATCTTTATCTCTTATGGTTTC
ATCCTCTCCAGCATCCTCCATATCAGTTCCAAGGAGGGCAGGTCCAAAGCTTTCAGCACT
TGCAGTTCCCATATAATTGCTGTTTCTCTGTTCTTTGGATCAGGTGCATTTATGTATCTC
AACCCATCTTCTGCTGGGTCCATGGATAAGAGAAAATTATCTTCTGTCTTTTATACAAAT
GTGGTTCCCATGTTGAACCCCTTAATCTACAGCCTGAGGAACAAAGATGTTAAATTTGCC
CTAAGAAAAGCCCTGAGTAGTAGGAAACTT

ORF Protein

Cloned ORF protein sequence for pF1KE0828 Download

>KIEE0828  190 aa
MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAFSGAMAHTGCMLRLTFCDANTIDHYFCD
ILPLLQLSCTSTYINELVVFTVVGINIIVPTVTIFISYGFILSSILHISSKEGRSKAFST
CSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKLSSVFYTNVVPMLNPLIYSLRNKDVKFA
LRKALSSRKL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0828 Download

>pF1KE0828  3683 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATCGCTGTG
GCCATCTGTAACCCACTTCTGTATCACATTGCCATGTCTCCTACAGTGTGCTCCAGCCTT
ATGTTTGGTTCCTATTTGATGGCCTTTTCTGGTGCCATGGCCCACACTGGATGCATGCTG
AGACTGACTTTCTGTGATGCGAACACCATCGATCACTACTTCTGTGACATCCTCCCTCTG
CTCCAGCTCTCCTGCACCAGCACCTACATCAATGAGCTGGTGGTTTTCACTGTGGTTGGC
ATCAACATCATTGTGCCCACTGTTACCATCTTTATCTCTTATGGTTTCATCCTCTCCAGC
ATCCTCCATATCAGTTCCAAGGAGGGCAGGTCCAAAGCTTTCAGCACTTGCAGTTCCCAT
ATAATTGCTGTTTCTCTGTTCTTTGGATCAGGTGCATTTATGTATCTCAACCCATCTTCT
GCTGGGTCCATGGATAAGAGAAAATTATCTTCTGTCTTTTATACAAATGTGGTTCCCATG
TTGAACCCCTTAATCTACAGCCTGAGGAACAAAGATGTTAAATTTGCCCTAAGAAAAGCC
CTGAGTAGTAGGAAACTTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT