Result of FASTA (omim) for pF1KE0828
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0828, 190 aa
  1>>>pF1KE0828 190 - 190 aa - 190 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0804+/-0.000453; mu= 13.9132+/- 0.028
 mean_var=61.1183+/-13.091, 0's: 0 Z-trim(108.8): 46  B-trim: 1133 in 1/46
 Lambda= 0.164055
 statistics sampled from 16862 (16890) to 16862 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.553), E-opt: 0.2 (0.198), width:  16
 Scan time:  5.120

The best scores are:                                      opt bits E(85289)
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311)  612 153.7 2.8e-37
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314)  567 143.0 4.5e-34
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314)  567 143.0 4.5e-34
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312)  535 135.4 8.5e-32
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312)  535 135.4 8.5e-32
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322)  535 135.5 8.7e-32
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312)  522 132.4 7.2e-31
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307)  519 131.7 1.2e-30
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311)  516 131.0 1.9e-30
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308)  503 127.9 1.6e-29
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314)  493 125.5 8.4e-29
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317)  485 123.6 3.1e-28
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327)  478 122.0   1e-27
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317)  475 121.3 1.6e-27
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317)  475 121.3 1.6e-27
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317)  475 121.3 1.6e-27
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309)  465 118.9 8.2e-27
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312)  462 118.2 1.4e-26
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312)  450 115.3 9.7e-26
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300)  433 111.3 1.5e-24
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318)  253 68.7 1.1e-11
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320)  236 64.7 1.7e-10


>>NP_001004729 (OMIM: 615702) olfactory receptor 5AN1 [H  (311 aa)
 initn: 658 init1: 606 opt: 612  Z-score: 790.4  bits: 153.7 E(85289): 2.8e-37
Smith-Waterman score: 612; 50.3% identity (81.1% similar) in 185 aa overlap (5-189:126-309)

                                         10        20        30    
pF1KE0                           MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAFS
                                     ::::::::   ::::.:  ...:.:. ...
NP_001 VGCIIQYFIFSTMGLSESCLMTAMAYDRYAAICNPLLYSSIMSPTLCVWMVLGAYMTGLT
         100       110       120       130       140       150     

           40        50        60        70        80        90    
pF1KE0 GAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVTI
       ... . : .:.: :: .:.: :.:::.  :: ::::.:.. ....  .. .  :. ...:
NP_001 ASLFQIGALLQLHFCGSNVIRHFFCDMPQLLILSCTDTFFVQVMTAILTMFFGIASALVI
         160       170       180       190       200       210     

          100       110       120       130       140       150    
pF1KE0 FISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKLS
       .::::.:  ::..:.: .::::::.::.::. :::::. :: :.::. ::.:: .  ...
NP_001 MISYGYIGISIMKITSAKGRSKAFNTCASHLTAVSLFYTSGIFVYLSSSSGGSSSFDRFA
         220       230       240       250       260       270     

          160       170       180       190 
pF1KE0 SVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL 
       ::::: :.:::::::::::::..: ::.. :..::  
NP_001 SVFYTVVIPMLNPLIYSLRNKEIKDALKR-LQKRKCC
         280       290       300        310 

>>NP_003688 (OMIM: 608492) olfactory receptor 5F1 [Homo   (314 aa)
 initn: 588 init1: 567 opt: 567  Z-score: 732.7  bits: 143.0 E(85289): 4.5e-34
Smith-Waterman score: 567; 45.4% identity (76.2% similar) in 185 aa overlap (5-189:125-309)

                                         10        20        30    
pF1KE0                           MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAFS
                                     ::: :::: . :: ::  ..  :..  .. 
NP_003 AGCFLQMYFFISLATTECILFGLMAYDRYAAICRPLLYSLIMSRTVYLKMAAGAFAAGLL
          100       110       120       130       140       150    

           40        50        60        70        80        90    
pF1KE0 GAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVTI
       . :..:. .  :.:::.:.: :.:::  ::..:::..: ..: .   ..:.::.   ..:
NP_003 NFMVNTSHVSSLSFCDSNVIHHFFCDSPPLFKLSCSDTILKESISSILAGVNIVGTLLVI
          160       170       180       190       200       210    

          100       110       120       130       140       150    
pF1KE0 FISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKLS
       . ::...: ::. . : ::: .:::::.::. :. ::...  . :: :::. :... :..
NP_003 LSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYLRPSSSYSLNQDKVA
          220       230       240       250       260       270    

          160       170       180       190    
pF1KE0 SVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL    
       ::::: :.:::::::::::.:.:: :: ...: ..     
NP_003 SVFYTVVIPMLNPLIYSLRSKEVKKALANVISRKRTSSFL
          280       290       300       310    

>>NP_006628 (OMIM: 608496) olfactory receptor 5I1 [Homo   (314 aa)
 initn: 551 init1: 551 opt: 567  Z-score: 732.7  bits: 143.0 E(85289): 4.5e-34
Smith-Waterman score: 567; 49.5% identity (74.2% similar) in 186 aa overlap (4-188:126-310)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::::::::: ..::  .:  :.  ::: . 
NP_006 YYGCALQFYFFCTFADTESFILAAMAYDRYVAICNPLLYTVVMSRGICMRLIVLSYLGGN
         100       110       120       130       140       150     

            40        50        60        70        80         90  
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINI-IVPTV
        ....::.  . : .:: :.:.:.:::. :::.::::.: ::: .. .. : .. :.  .
NP_006 MSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLL-STYGSSVEIICFI
         160       170       180       190       200        210    

            100       110       120       130       140       150  
pF1KE0 TIFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRK
        :.::: ::: :.:.: :  ::.:.::::.::. .:... :.  :.:  ::   : .  :
NP_006 IIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIYSRPSYLYSPNTDK
          220       230       240       250       260       270    

            160       170       180       190  
pF1KE0 LSSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL  
       . :::::  .:.:::::::::::::: : .:.: :.    
NP_006 IISVFYTIFIPVLNPLIYSLRNKDVKDAAEKVLRSKVDSS
          280       290       300       310    

>>NP_036492 (OMIM: 603232) olfactory receptor 1F1 [Homo   (312 aa)
 initn: 565 init1: 535 opt: 535  Z-score: 691.8  bits: 135.4 E(85289): 8.5e-32
Smith-Waterman score: 535; 42.9% identity (74.7% similar) in 182 aa overlap (4-185:124-305)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::.:.:: :   :.  .:. :. : ...: 
NP_036 FCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVAN
           100       110       120       130       140       150   

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVT
        ... ::  :  :.::  :.: :.:::. :::.:::..:..::.....  .. .:.: . 
NP_036 LNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLC
           160       170       180       190       200       210   

           100       110       120       130       140       150   
pF1KE0 IFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKL
       :. ::  :  ..:.. : .:: ::::::.::. .: ::...   .:.:: :. : .:  .
NP_036 ILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTM
           220       230       240       250       260       270   

           160       170       180       190  
pF1KE0 SSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL  
       ..:.:: :.:::::.::::::. .: ::.:..       
NP_036 ATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
           280       290       300       310  

>>XP_011520809 (OMIM: 603232) PREDICTED: olfactory recep  (312 aa)
 initn: 565 init1: 535 opt: 535  Z-score: 691.8  bits: 135.4 E(85289): 8.5e-32
Smith-Waterman score: 535; 42.9% identity (74.7% similar) in 182 aa overlap (4-185:124-305)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::.:.:: :   :.  .:. :. : ...: 
XP_011 FCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVAN
           100       110       120       130       140       150   

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVT
        ... ::  :  :.::  :.: :.:::. :::.:::..:..::.....  .. .:.: . 
XP_011 LNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLC
           160       170       180       190       200       210   

           100       110       120       130       140       150   
pF1KE0 IFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKL
       :. ::  :  ..:.. : .:: ::::::.::. .: ::...   .:.:: :. : .:  .
XP_011 ILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTM
           220       230       240       250       260       270   

           160       170       180       190  
pF1KE0 SSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL  
       ..:.:: :.:::::.::::::. .: ::.:..       
XP_011 ATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
           280       290       300       310  

>>XP_011520808 (OMIM: 603232) PREDICTED: olfactory recep  (322 aa)
 initn: 565 init1: 535 opt: 535  Z-score: 691.6  bits: 135.5 E(85289): 8.7e-32
Smith-Waterman score: 535; 42.9% identity (74.7% similar) in 182 aa overlap (4-185:134-315)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::.:.:: :   :.  .:. :. : ...: 
XP_011 FCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVAN
           110       120       130       140       150       160   

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVT
        ... ::  :  :.::  :.: :.:::. :::.:::..:..::.....  .. .:.: . 
XP_011 LNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLC
           170       180       190       200       210       220   

           100       110       120       130       140       150   
pF1KE0 IFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKL
       :. ::  :  ..:.. : .:: ::::::.::. .: ::...   .:.:: :. : .:  .
XP_011 ILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTM
           230       240       250       260       270       280   

           160       170       180       190  
pF1KE0 SSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL  
       ..:.:: :.:::::.::::::. .: ::.:..       
XP_011 ATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
           290       300       310       320  

>>NP_001005191 (OMIM: 611538) olfactory receptor 7D4 [Ho  (312 aa)
 initn: 522 init1: 522 opt: 522  Z-score: 675.2  bits: 132.4 E(85289): 7.2e-31
Smith-Waterman score: 522; 42.6% identity (78.1% similar) in 183 aa overlap (4-186:124-306)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::::.:: : . :.: .:. :...:... :
NP_001 YMGCLTQVYFLMMFAGMDTFLLAVMAYDRFVAICHPLHYTVIMNPCLCGLLVLASWFIIF
           100       110       120       130       140       150   

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVT
         ...:   : ::::  .. : :.::.   .:...:..: .:..:.......  . :.. 
NP_001 WFSLVHILLMKRLTFSTGTEIPHFFCEPAQVLKVACSNTLLNNIVLYVATALLGVFPVAG
           160       170       180       190       200       210   

           100       110       120       130       140       150   
pF1KE0 IFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKL
       :..::. :.::.. .:: .:. ::::::.::. .::::.:.:  .::. . . : .. . 
NP_001 ILFSYSQIVSSLMGMSSTKGKYKAFSTCGSHLCVVSLFYGTGLGVYLSSAVTHSSQSSST
           220       230       240       250       260       270   

           160       170       180       190  
pF1KE0 SSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL  
       .::.:. :.:::::.:::::::::: ::.. ::      
NP_001 ASVMYAMVTPMLNPFIYSLRNKDVKGALERLLSRADSCP
           280       290       300       310  

>>NP_001005487 (OMIM: 611677) olfactory receptor 13G1 [H  (307 aa)
 initn: 557 init1: 516 opt: 519  Z-score: 671.5  bits: 131.7 E(85289): 1.2e-30
Smith-Waterman score: 519; 41.3% identity (75.0% similar) in 184 aa overlap (4-186:121-303)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     :::: :: :   :.  .: .:.   . .: 
NP_001 YAGCMSQLFLFTWSLGAEMVLFTTMAYDRYVAICFPLHYSTIMNHHMCVALLSMVMAIAV
              100       110       120       130       140       150

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPT-V
       ... .::. ..:::::  :::::.::.: ::: :::. . :::..:. :. :.. .   .
NP_001 TNSWVHTALIMRLTFCGPNTIDHFFCEIPPLLALSCSPVRINEVMVY-VADITLAIGDFI
              160       170       180       190        200         

            100       110       120       130       140       150  
pF1KE0 TIFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRK
          ::::::. .::.: . ::. :::::::::. .:.:...   . :. :.:. .... :
NP_001 LTCISYGFIIVAILRIRTVEGKRKAFSTCSSHLTVVTLYYSPVIYTYIRPASSYTFERDK
     210       220       230       240       250       260         

            160       170       180       190
pF1KE0 LSSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL
       . ...:: :.: :::..::..:.... ..::...    
NP_001 VVAALYTLVTPTLNPMVYSFQNREMQAGIRKVFAFLKH
     270       280       290       300       

>>NP_001005216 (OMIM: 615016,615082) olfactory receptor   (311 aa)
 initn: 443 init1: 415 opt: 516  Z-score: 667.6  bits: 131.0 E(85289): 1.9e-30
Smith-Waterman score: 516; 40.3% identity (74.0% similar) in 181 aa overlap (5-185:128-308)

                                         10        20        30    
pF1KE0                           MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAFS
                                     :.: :: : . : :  :  :  .:.. .:.
NP_001 AGCMIQLYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVASWVSGFT
       100       110       120       130       140       150       

           40        50        60        70        80        90    
pF1KE0 GAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVTI
       ..  :..  . . .:    .::.::..  ::.:::..:..:::... . .: ...: . :
NP_001 NSALHSSFTFWVPLCGHRQVDHFFCEVPALLRLSCVDTHVNELTLMITSSIFVLIPLILI
       160       170       180       190       200       210       

          100       110       120       130       140       150    
pF1KE0 FISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKLS
       . ::: :. .::...:  : .:.:.::..:..::::::  .  :::.: :..:.:. :. 
NP_001 LTSYGAIVRAILRMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCMYLQPPSGNSQDQGKFI
       220       230       240       250       260       270       

          160       170       180       190
pF1KE0 SVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL
       ..::: :.: ::::::.:::: :. :... .     
NP_001 ALFYTVVTPSLNPLIYTLRNKVVRGAVKRLMGWE  
       280       290       300       310   

>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo   (308 aa)
 initn: 504 init1: 364 opt: 503  Z-score: 651.0  bits: 127.9 E(85289): 1.6e-29
Smith-Waterman score: 503; 45.0% identity (73.3% similar) in 180 aa overlap (4-183:124-301)

                                          10        20        30   
pF1KE0                            MIAVAICNPLLYHIAMSPTVCSSLMFGSYLMAF
                                     ::::::: :   :.  :: .:  ::.  ..
NP_003 FTLCAARLLFFLIFGCTQCALLAVMSYDRYVAICNPLRYPNIMTWKVCVQLATGSWTSGI
           100       110       120       130       140       150   

            40        50        60        70        80        90   
pF1KE0 SGAMAHTGCMLRLTFCDANTIDHYFCDILPLLQLSCTSTYINELVVFTVVGINIIVPTVT
         ... :  .::: .  .:.: :.::.   :: :. :.:. .:...: .  . ...:.  
NP_003 LVSVVDTTFILRLPYRGSNSIAHFFCEAPALLILASTDTHASEMAIFLMGVVILLIPVFL
           160       170       180       190       200       210   

           100       110       120       130       140       150   
pF1KE0 IFISYGFILSSILHISSKEGRSKAFSTCSSHIIAVSLFFGSGAFMYLNPSSAGSMDKRKL
       :..::: :. ......:  :  ::::::.::...: ::.::. . :..:.:  : ...: 
NP_003 ILVSYGRIIVTVVKMKSTVGSLKAFSTCGSHLMVVILFYGSAIITYMTPKS--SKQQEKS
           220       230       240       250       260         270 

           160       170       180       190
pF1KE0 SSVFYTNVVPMLNPLIYSLRNKDVKFALRKALSSRKL
        ::::. :.:::::::::::::::: ::::       
NP_003 VSVFYAIVTPMLNPLIYSLRNKDVKAALRKVATRNFP
             280       290       300        




190 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:05:02 2016 done: Sat Nov  5 12:05:03 2016
 Total Scan time:  5.120 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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