SCTR ORF clone FXC03512

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Flexi ORF Clone FXC03512

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Clone info.

Species

human

Clone Name

pF1KB6630 Sequence (with vector) Restriction Map

Product ID

FXC03512

HaloTag Clone PID

FHC03512

ORF Sequence

DNA sequence (1320 bp)
Protein sequence (440 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527596]

Gene

KIBB6630

Symbol

SCTR

Alias : SR

Description

secretin receptor

Original Clone ID

cs01230

Features of the cloned ORF sequence

Description

Length: 1320 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 440 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2127.1 2e-194 100.0 SCTR CCDS2698.1 4.4e-90 49.3 VIPR1 CCDS56481.1 2e-89 49.9 ADCYAP1R1 CCDS58828.1 8.9e-88 51.3 VIPR1 CCDS58827.1 2.6e-87 53.1 VIPR1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002144 2 14 PR00490 GPCR IPR002144 18 34 PR00490 GPCR IPR002144 37 52 PR00490 GPCR IPR002144 52 63 PR00490 GPCR IPR002144 90 104 PR00490 GPCR IPR002144 123 136 PR00490 GPCR IPR000832 144 168 PR00249 GPCR IPR000832 176 200 PR00249 GPCR IPR000832 217 240 PR00249 GPCR IPR000832 255 280 PR00249 GPCR IPR000832 296 321 PR00249 GPCR IPR000832 340 360 PR00249 GPCR IPR000832 370 391 PR00249 GPCR IPR002144 405 417 PR00490 GPCR IPR002144 429 439 PR00490 GPCR HMMPfam IPR001879 64 124 PF02793 GPCR IPR000832 141 384 PF00002 GPCR HMMSmart IPR001879 62 132 SM00008 GPCR ProfileScan NULL 1 20 PS51257 NULL IPR001879 44 127 PS50227 GPCR IPR017981 142 392 PS50261 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 13 LLPVLLACAAHSTGALPRLCDVL 35 SECONDARY 23 2 147 TVGYSSSLVMLLVALGILCAFR 168 PRIMARY 22 3 220 VLFQYCIMANYSWLLVEGLYLHT 242 SECONDARY 23 4 256 QGFVAFGWGSPAIFVALWAIARH 278 SECONDARY 23 5 297 IIRGPVILSILINFILFINILRI 319 PRIMARY 23 6 340 LARSTLLLIPLFGIHYIVFAFSP 362 PRIMARY 23 7 371 FFELALGSFQGLVVAVLYCFLNG 393 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002971 440 182098 100.0 100.0 XP_011509923 445 182098 98.9 100.0 XP_016860159 435 182098 96.3 97.5 XP_016860161 377 182098 98.7 84.5 XP_016860160 409 182098 90.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6630 Download

>KIBB6630  1320 bp
ATGCGTCCCCACCTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGC
GCCGCGCACTCGACTGGAGCCCTTCCCCGACTATGTGACGTGCTACAAGTGCTGTGGGAA
GAGCAAGACCAGTGCCTGCAGGAACTCTCCAGAGAGCAGACAGGAGACCTGGGCACGGAG
CAGCCAGTGCCAGGTTGTGAGGGGATGTGGGACAACATAAGCTGCTGGCCCTCTTCTGTG
CCGGGCCGGATGGTGGAGGTGGAATGCCCGAGATTCCTCCGGATGCTCACCAGCAGAAAT
GGTTCCTTGTTCCGAAACTGCACACAGGATGGCTGGTCAGAAACCTTCCCCAGGCCTAAT
CTGGCCTGTGGCGTTAATGTGAACGACTCTTCCAACGAGAAGCGGCACTCCTACCTGCTG
AAGCTGAAAGTCATGTACACCGTGGGCTACAGCTCCTCCCTGGTCATGCTCCTGGTCGCC
CTTGGCATCCTCTGTGCTTTCCGGAGGCTCCACTGCACTCGCAACTACATCCACATGCAC
CTGTTCGTGTCCTTCATCCTTCGTGCCCTGTCCAACTTCATCAAGGACGCCGTGCTCTTC
TCCTCAGATGATGTCACCTACTGCGATGCCCACAGGGCGGGCTGCAAGCTGGTCATGGTG
CTGTTCCAGTACTGCATCATGGCCAACTACTCCTGGCTGCTGGTGGAAGGCCTCTACCTT
CACACACTCCTCGCCATCTCCTTCTTCTCTGAAAGAAAGTACCTCCAGGGATTTGTGGCA
TTCGGATGGGGTTCTCCAGCCATTTTTGTTGCTTTGTGGGCTATTGCCAGACACTTTCTG
GAAGATGTTGGGTGCTGGGACATCAATGCCAACGCATCCATCTGGTGGATCATTCGTGGT
CCTGTGATCCTCTCCATCCTGATTAATTTCATCCTTTTCATAAACATTCTAAGAATCCTG
ATGAGAAAACTTAGAACCCAAGAAACAAGAGGAAATGAAGTCAGCCATTATAAGCGCCTG
GCCAGGTCCACTCTCCTGCTGATCCCCCTCTTTGGCATCCACTACATCGTCTTCGCCTTC
TCCCCAGAGGACGCTATGGAGATCCAGCTGTTTTTTGAACTAGCCCTTGGCTCATTCCAG
GGACTGGTGGTGGCCGTCCTCTACTGCTTCCTCAATGGGGAGGTGCAGCTGGAGGTTCAG
AAGAAGTGGCAGCAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGC
AACAGCACCAAGGCCAGCCACTTGGAGCAGAGCCAGGGCACCTGCAGGACCAGCATCATC

ORF Protein

Cloned ORF protein sequence for pF1KB6630 Download

>KIBB6630  440 aa
MRPHLSPPLQQLLLPVLLACAAHSTGALPRLCDVLQVLWEEQDQCLQELSREQTGDLGTE
QPVPGCEGMWDNISCWPSSVPGRMVEVECPRFLRMLTSRNGSLFRNCTQDGWSETFPRPN
LACGVNVNDSSNEKRHSYLLKLKVMYTVGYSSSLVMLLVALGILCAFRRLHCTRNYIHMH
LFVSFILRALSNFIKDAVLFSSDDVTYCDAHRAGCKLVMVLFQYCIMANYSWLLVEGLYL
HTLLAISFFSERKYLQGFVAFGWGSPAIFVALWAIARHFLEDVGCWDINANASIWWIIRG
PVILSILINFILFINILRILMRKLRTQETRGNEVSHYKRLARSTLLLIPLFGIHYIVFAF
SPEDAMEIQLFFELALGSFQGLVVAVLYCFLNGEVQLEVQKKWQQWHLREFPLHPVASFS
NSTKASHLEQSQGTCRTSII

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6630 Download

>pF1KB6630  4433 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCGTCCCCAC
CTGTCGCCGCCGCTGCAGCAGCTACTACTGCCGGTGCTGCTCGCCTGCGCCGCGCACTCG
ACTGGAGCCCTTCCCCGACTATGTGACGTGCTACAAGTGCTGTGGGAAGAGCAAGACCAG
TGCCTGCAGGAACTCTCCAGAGAGCAGACAGGAGACCTGGGCACGGAGCAGCCAGTGCCA
GGTTGTGAGGGGATGTGGGACAACATAAGCTGCTGGCCCTCTTCTGTGCCGGGCCGGATG
GTGGAGGTGGAATGCCCGAGATTCCTCCGGATGCTCACCAGCAGAAATGGTTCCTTGTTC
CGAAACTGCACACAGGATGGCTGGTCAGAAACCTTCCCCAGGCCTAATCTGGCCTGTGGC
GTTAATGTGAACGACTCTTCCAACGAGAAGCGGCACTCCTACCTGCTGAAGCTGAAAGTC
ATGTACACCGTGGGCTACAGCTCCTCCCTGGTCATGCTCCTGGTCGCCCTTGGCATCCTC
TGTGCTTTCCGGAGGCTCCACTGCACTCGCAACTACATCCACATGCACCTGTTCGTGTCC
TTCATCCTTCGTGCCCTGTCCAACTTCATCAAGGACGCCGTGCTCTTCTCCTCAGATGAT
GTCACCTACTGCGATGCCCACAGGGCGGGCTGCAAGCTGGTCATGGTGCTGTTCCAGTAC
TGCATCATGGCCAACTACTCCTGGCTGCTGGTGGAAGGCCTCTACCTTCACACACTCCTC
GCCATCTCCTTCTTCTCTGAAAGAAAGTACCTCCAGGGATTTGTGGCATTCGGATGGGGT
TCTCCAGCCATTTTTGTTGCTTTGTGGGCTATTGCCAGACACTTTCTGGAAGATGTTGGG
TGCTGGGACATCAATGCCAACGCATCCATCTGGTGGATCATTCGTGGTCCTGTGATCCTC
TCCATCCTGATTAATTTCATCCTTTTCATAAACATTCTAAGAATCCTGATGAGAAAACTT
AGAACCCAAGAAACAAGAGGAAATGAAGTCAGCCATTATAAGCGCCTGGCCAGGTCCACT
CTCCTGCTGATCCCCCTCTTTGGCATCCACTACATCGTCTTCGCCTTCTCCCCAGAGGAC
GCTATGGAGATCCAGCTGTTTTTTGAACTAGCCCTTGGCTCATTCCAGGGACTGGTGGTG
GCCGTCCTCTACTGCTTCCTCAATGGGGAGGTGCAGCTGGAGGTTCAGAAGAAGTGGCAG
CAATGGCACCTCCGTGAGTTCCCACTGCACCCCGTGGCCTCCTTCAGCAACAGCACCAAG
GCCAGCCACTTGGAGCAGAGCCAGGGCACCTGCAGGACCAGCATCATCGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT