OR52I1 ORF clone FXC02474

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Flexi ORF Clone FXC02474

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Clone info.

Species

human

Clone Name

pF1KB7448 Sequence (with vector) Restriction Map

Product ID

FXC02474

HaloTag Clone PID

FHC02474

ORF Sequence

DNA sequence (972 bp)
Protein sequence (324 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463977]

Gene

KIBB7448

Symbol

OR52I1

Alias : OR11-13

Description

olfactory receptor, family 52, subfamily I, member 1

Original Clone ID

oc00662

Features of the cloned ORF sequence

Description

Length: 972 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 324 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59223.1 1.7e-100 100.0 OR52I1 CCDS31355.1 6.5e-96 95.1 OR52I2 CCDS53598.1 2e-42 47.1 OR52B2 CCDS31370.1 4.8e-42 44.2 OR52J3 CCDS31384.1 1.7e-41 45.9 OR52D1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 30 54 PR00237 GPCR IPR000276 63 84 PR00237 GPCR IPR000725 96 107 PR00245 Olfactory receptor IPR000276 108 130 PR00237 GPCR IPR000725 133 145 PR00245 Olfactory receptor IPR000725 180 196 PR00245 Olfactory receptor IPR000725 240 249 PR00245 Olfactory receptor IPR000276 279 305 PR00237 GPCR IPR000725 290 301 PR00245 Olfactory receptor HMMPfam IPR000276 45 297 PF00001 GPCR ProfileScan IPR017452 45 297 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 31 LAISLSAMYITALLGNTLIVTAI 53 PRIMARY 23 2 66 FLCVLAAVDIVMASSVVPKMVSI 88 PRIMARY 23 3 104 QMFFVHLATAVETGLLLTMAFDR 126 SECONDARY 23 4 141 TPQVMLGMSMAVTIRAVTFMTPL 163 SECONDARY 23 5 205 IGSSLMVGSDVAFIAASYILILR 227 PRIMARY 23 6 246 GSHVGVMALYYLPGMASIYAAWL 268 SECONDARY 23 7 274 PLHTQVLLADLYVIIPATLNPII 296 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 42.3 90.4 NP_689643 318 611267 40.0 95.1 NP_001005487 307 611677 31.9 95.1 NP_002539 312 164342 31.1 92.6 NP_835462 317 608493 33.7 89.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7448 Download

>KIBB7448  972 bp
ATGCTGGGTCCAGCTTACAACCACACAATGGAAACCCCTGCCTCCTTCCTCCTTGTGGGT
ATCCCAGGACTGCAATCTTCACATCTTTGGCTGGCTATCTCACTGAGTGCCATGTACATC
ACAGCCCTGTTAGGAAACACCCTCATCGTGACTGCAATCTGGATGGATTCCACTCGGCAT
GAGCCCATGTATTGCTTTCTGTGTGTTCTGGCTGCTGTGGACATTGTTATGGCCTCCTCC
GTGGTACCCAAGATGGTGAGCATCTTCTGCTCGGGAGACAGCTCCATCAGCTTTAGTGCT
TGTTTCACTCAGATGTTTTTTGTCCACTTAGCCACAGCTGTGGAGACGGGGCTGCTGCTG
ACCATGGCTTTTGACCGCTATGTAGCCATCTGCAAGCCTCTACACTACAAGAGAATTCTC
ACGCCTCAAGTGATGCTGGGAATGAGTATGGCCGTCACCATCAGAGCTGTCACATTCATG
ACTCCACTGAGTTGGATGATGAATCATCTACCTTTCTGTGGCTCCAATGTGGTTGTCCAC
TCCTACTGTAAGCACATAGCTTTGGCCAGGTTAGCATGTGCTGACCCCGTGCCCAGCAGT
CTCTACAGTCTGATTGGTTCCTCTCTTATGGTGGGCTCTGATGTGGCCTTCATTGCTGCC
TCCTATATCTTAATTCTCAGGGCAGTATTTGATCTCTCCTCAAAGACTGCTCAGTTGAAA
GCATTAAGCACATGTGGCTCCCATGTGGGGGTTATGGCTTTGTACTATCTACCTGGGATG
GCATCCATCTATGCGGCCTGGTTGGGGCAGGATATAGTGCCCTTGCACACCCAAGTGCTG
CTAGCTGACCTGTACGTGATCATCCCAGCCACTTTAAATCCCATCATCTATGGCATGAGG
ACCAAACAATTGCTGGAGGGAATATGGAGTTATCTGATGCACTTCCTCTTTGACCACTCC
AACCTGGGTTCA

ORF Protein

Cloned ORF protein sequence for pF1KB7448 Download

>KIBB7448  324 aa
MLGPAYNHTMETPASFLLVGIPGLQSSHLWLAISLSAMYITALLGNTLIVTAIWMDSTRH
EPMYCFLCVLAAVDIVMASSVVPKMVSIFCSGDSSISFSACFTQMFFVHLATAVETGLLL
TMAFDRYVAICKPLHYKRILTPQVMLGMSMAVTIRAVTFMTPLSWMMNHLPFCGSNVVVH
SYCKHIALARLACADPVPSSLYSLIGSSLMVGSDVAFIAASYILILRAVFDLSSKTAQLK
ALSTCGSHVGVMALYYLPGMASIYAAWLGQDIVPLHTQVLLADLYVIIPATLNPIIYGMR
TKQLLEGIWSYLMHFLFDHSNLGS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7448 Download

>pF1KB7448  4085 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGGTCCA
GCTTACAACCACACAATGGAAACCCCTGCCTCCTTCCTCCTTGTGGGTATCCCAGGACTG
CAATCTTCACATCTTTGGCTGGCTATCTCACTGAGTGCCATGTACATCACAGCCCTGTTA
GGAAACACCCTCATCGTGACTGCAATCTGGATGGATTCCACTCGGCATGAGCCCATGTAT
TGCTTTCTGTGTGTTCTGGCTGCTGTGGACATTGTTATGGCCTCCTCCGTGGTACCCAAG
ATGGTGAGCATCTTCTGCTCGGGAGACAGCTCCATCAGCTTTAGTGCTTGTTTCACTCAG
ATGTTTTTTGTCCACTTAGCCACAGCTGTGGAGACGGGGCTGCTGCTGACCATGGCTTTT
GACCGCTATGTAGCCATCTGCAAGCCTCTACACTACAAGAGAATTCTCACGCCTCAAGTG
ATGCTGGGAATGAGTATGGCCGTCACCATCAGAGCTGTCACATTCATGACTCCACTGAGT
TGGATGATGAATCATCTACCTTTCTGTGGCTCCAATGTGGTTGTCCACTCCTACTGTAAG
CACATAGCTTTGGCCAGGTTAGCATGTGCTGACCCCGTGCCCAGCAGTCTCTACAGTCTG
ATTGGTTCCTCTCTTATGGTGGGCTCTGATGTGGCCTTCATTGCTGCCTCCTATATCTTA
ATTCTCAGGGCAGTATTTGATCTCTCCTCAAAGACTGCTCAGTTGAAAGCATTAAGCACA
TGTGGCTCCCATGTGGGGGTTATGGCTTTGTACTATCTACCTGGGATGGCATCCATCTAT
GCGGCCTGGTTGGGGCAGGATATAGTGCCCTTGCACACCCAAGTGCTGCTAGCTGACCTG
TACGTGATCATCCCAGCCACTTTAAATCCCATCATCTATGGCATGAGGACCAAACAATTG
CTGGAGGGAATATGGAGTTATCTGATGCACTTCCTCTTTGACCACTCCAACCTGGGTTCA
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT