OR1L1 ORF clone FXC02416

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Flexi ORF Clone FXC02416

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Clone info.

Species

human

Clone Name

pF1KB7388 Sequence (with vector) Restriction Map

Product ID

FXC02416

HaloTag Clone PID

FHC02416

ORF Sequence

DNA sequence (1080 bp)
Protein sequence (360 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463952]

Gene

KIBB7388

Symbol

OR1L1

Alias : HG23, OR1L2, OR9-27, OR9-C

Description

olfactory receptor, family 1, subfamily L, member 1

Original Clone ID

oc00602

Features of the cloned ORF sequence

Description

Length: 1080 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 360 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35127.2 1.5e-80 100.0 OR1L1 CCDS35128.1 1.6e-62 78.1 OR1L3 CCDS35130.2 3.8e-54 69.0 OR1L6 CCDS35124.1 5.6e-54 69.6 OR1L8 CCDS35129.1 6.2e-54 69.0 OR1L4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 76 100 PR00237 GPCR IPR000276 109 130 PR00237 GPCR IPR000725 142 153 PR00245 Olfactory receptor IPR000276 154 176 PR00237 GPCR IPR000725 179 191 PR00245 Olfactory receptor IPR000725 226 242 PR00245 Olfactory receptor IPR000276 249 272 PR00237 GPCR IPR000725 286 295 PR00245 Olfactory receptor IPR000276 321 347 PR00237 GPCR IPR000725 332 343 PR00245 Olfactory receptor HMMPfam IPR000276 91 339 PF00001 GPCR ProfileScan IPR017452 91 339 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 78 FAVFLPIYLITVIGNLLIILAIR 100 PRIMARY 23 2 110 YFFLSILSFVDICYVTVIIPKML 132 PRIMARY 23 3 181 HYITIMSHRCCVLLLVLSFCIPH 203 SECONDARY 23 4 253 GLAVIMTPFSCIIISYLRILITV 275 PRIMARY 23 5 287 AFSTCGSHLTVVTLFYGSISYLY 309 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520808 322 603232 53.8 86.4 NP_036492 312 603232 54.2 85.3 XP_011520809 312 603232 54.2 85.3 NP_002539 312 164342 50.3 85.0 NP_006628 314 608496 52.2 83.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7388 Download

>KIBB7388  1080 bp
ATGGAAAGAAACCACAATCCAGATAATTGTAATGTTTTAAATTTTTTCTTTGCTGATAAG
AAGAATAAAAGGAGAAATTTTGGACAGATTGTATCAGATGTTGGAAGAATCTGTTACAGT
GTTAGTTTATCTTTAGGTGAACCCACAACTATGGGAAGAAATAACCTAACAAGACCCTCT
GAATTCATCCTCCTTGGACTCTCCTCTCGACCTGAGGATCAGAAGCCGCTCTTTGCTGTG
TTCCTCCCCATCTACCTTATCACAGTGATAGGAAACCTGCTTATCATCCTGGCCATCCGC
TCAGACACTCGTCTCCAGACGCCCATGTACTTCTTTCTAAGCATCCTGTCTTTTGTTGAC
ATTTGCTATGTGACAGTCATTATCCCTAAGATGCTGGTGAACTTCTTATCAGAGACAAAG
ACCATCTCTTACAGTGAGTGTCTGACCCAGATGTACTTTTTCTTAGCCTTTGGAAACACA
GACAGTTACCTGCTAGCAGCCATGGCCATTGACCGCTATGTGGCCATATGTAATCCCTTC
CACTACATCACCATTATGAGTCACAGATGCTGTGTCCTGCTTCTGGTTCTCTCCTTCTGC
ATTCCACATTTTCACTCCCTCCTGCACATTCTTCTGACTAATCAGCTCATCTTCTGTGCC
TCAAATGTCATCCATCACTTTTTCTGCGATGATCAACCAGTGCTAAAATTGTCCTGTTCC
TCCCATTTTGTCAAAGAAATCACAGTAATGACAGAAGGCTTGGCTGTCATAATGACCCCG
TTTTCATGCATCATCATCTCTTATTTAAGAATCCTCATCACTGTTCTGAAGATTCCTTCA
GCTGCTGGAAAGCGTAAAGCATTTTCTACCTGTGGCTCTCATCTCACAGTGGTGACCCTG
TTTTATGGAAGCATTAGCTATCTCTATTTTCAGCCCCTGTCCAACTATACTGTCAAGGAT
CAAATAGCAACAATTATCTACACCGTACTGACTCCTATGCTAAATCCATTTATCTATAGT
CTGAGGAACAAAGACATGAAGCAGGGTTTGGCAAAGTTGATGCACAGGATGAAATGTCAG

ORF Protein

Cloned ORF protein sequence for pF1KB7388 Download

>KIBB7388  360 aa
MERNHNPDNCNVLNFFFADKKNKRRNFGQIVSDVGRICYSVSLSLGEPTTMGRNNLTRPS
EFILLGLSSRPEDQKPLFAVFLPIYLITVIGNLLIILAIRSDTRLQTPMYFFLSILSFVD
ICYVTVIIPKMLVNFLSETKTISYSECLTQMYFFLAFGNTDSYLLAAMAIDRYVAICNPF
HYITIMSHRCCVLLLVLSFCIPHFHSLLHILLTNQLIFCASNVIHHFFCDDQPVLKLSCS
SHFVKEITVMTEGLAVIMTPFSCIIISYLRILITVLKIPSAAGKRKAFSTCGSHLTVVTL
FYGSISYLYFQPLSNYTVKDQIATIIYTVLTPMLNPFIYSLRNKDMKQGLAKLMHRMKCQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7388 Download

>pF1KB7388  4193 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAAAGAAAC
CACAATCCAGATAATTGTAATGTTTTAAATTTTTTCTTTGCTGATAAGAAGAATAAAAGG
AGAAATTTTGGACAGATTGTATCAGATGTTGGAAGAATCTGTTACAGTGTTAGTTTATCT
TTAGGTGAACCCACAACTATGGGAAGAAATAACCTAACAAGACCCTCTGAATTCATCCTC
CTTGGACTCTCCTCTCGACCTGAGGATCAGAAGCCGCTCTTTGCTGTGTTCCTCCCCATC
TACCTTATCACAGTGATAGGAAACCTGCTTATCATCCTGGCCATCCGCTCAGACACTCGT
CTCCAGACGCCCATGTACTTCTTTCTAAGCATCCTGTCTTTTGTTGACATTTGCTATGTG
ACAGTCATTATCCCTAAGATGCTGGTGAACTTCTTATCAGAGACAAAGACCATCTCTTAC
AGTGAGTGTCTGACCCAGATGTACTTTTTCTTAGCCTTTGGAAACACAGACAGTTACCTG
CTAGCAGCCATGGCCATTGACCGCTATGTGGCCATATGTAATCCCTTCCACTACATCACC
ATTATGAGTCACAGATGCTGTGTCCTGCTTCTGGTTCTCTCCTTCTGCATTCCACATTTT
CACTCCCTCCTGCACATTCTTCTGACTAATCAGCTCATCTTCTGTGCCTCAAATGTCATC
CATCACTTTTTCTGCGATGATCAACCAGTGCTAAAATTGTCCTGTTCCTCCCATTTTGTC
AAAGAAATCACAGTAATGACAGAAGGCTTGGCTGTCATAATGACCCCGTTTTCATGCATC
ATCATCTCTTATTTAAGAATCCTCATCACTGTTCTGAAGATTCCTTCAGCTGCTGGAAAG
CGTAAAGCATTTTCTACCTGTGGCTCTCATCTCACAGTGGTGACCCTGTTTTATGGAAGC
ATTAGCTATCTCTATTTTCAGCCCCTGTCCAACTATACTGTCAAGGATCAAATAGCAACA
ATTATCTACACCGTACTGACTCCTATGCTAAATCCATTTATCTATAGTCTGAGGAACAAA
GACATGAAGCAGGGTTTGGCAAAGTTGATGCACAGGATGAAATGTCAGGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT